Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 AC004232.1-201ENST00000571388 208 ntBASIC7□□□□□ -1.29
PHACTR1Q9C0D0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 AC010928.3-201ENST00000587712 541 ntBASIC7□□□□□ -1.29
PHACTR1Q9C0D0 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7□□□□□ -1.29
PHACTR1Q9C0D0 YWHAQP7-201ENST00000603536 658 ntBASIC7□□□□□ -1.29
PHACTR1Q9C0D0 BNIP3P10-201ENST00000605360 577 ntBASIC7□□□□□ -1.29
PHACTR1Q9C0D0 AL136295.6-201ENST00000610486 658 ntBASIC7□□□□□ -1.29
PHACTR1Q9C0D0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 MAPK6PS2-201ENST00000379571 2060 ntBASIC7□□□□□ -1.29
PHACTR1Q9C0D0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7□□□□□ -1.29
PHACTR1Q9C0D0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 Y_RNA.1-201ENST00000352915 104 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 Y_RNA.409-201ENST00000383990 98 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 RNU6-1103P-201ENST00000384150 107 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL359715.1-201ENST00000404330 555 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL139128.1-201ENST00000413921 941 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL354751.2-201ENST00000415471 210 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 BX295541.1-201ENST00000417774 250 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC127526.2-201ENST00000426436 775 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 SNX18P9-201ENST00000440580 835 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 CALM1P1-201ENST00000442082 433 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 MTND6P13-201ENST00000443510 523 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL935212.3-201ENST00000450729 284 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL590365.1-201ENST00000450788 243 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 MTCO3P20-201ENST00000454926 688 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC079594.1-201ENST00000489757 331 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC111000.3-201ENST00000508057 576 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 HMGB1P23-201ENST00000518743 568 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 NXPE2P1-201ENST00000543705 726 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC023310.2-201ENST00000553844 547 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 CYCSP2-201ENST00000558168 301 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC141257.3-201ENST00000572906 215 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL161729.3-201ENST00000603533 673 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL035413.2-201ENST00000604801 525 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC104010.1-201ENST00000616889 150 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC116563.2-201ENST00000624751 535 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 AC095038.1-201ENST00000429248 1591 ntBASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PHACTR1Q9C0D0 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
PHACTR1Q9C0D0 AC068870.3-201ENST00000625077 2536 ntBASIC6.98□□□□□ -1.29
PHACTR1Q9C0D0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PHACTR1Q9C0D0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PHACTR1Q9C0D0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.98□□□□□ -1.29
PHACTR1Q9C0D0 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PHACTR1Q9C0D0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PHACTR1Q9C0D0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.98□□□□□ -1.29
PHACTR1Q9C0D0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.98□□□□□ -1.29
PHACTR1Q9C0D0 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms