Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL390119.1-201ENST00000440329 312 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX3Q99909 AL353718.1-201ENST00000451028 517 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX3Q99909 RN7SL51P-201ENST00000468230 285 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AC006511.1-201ENST00000470614 315 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 AC011037.1-201ENST00000483964 558 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 RN7SL214P-201ENST00000487317 265 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AC108693.1-201ENST00000496068 432 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
SSX3Q99909 IGKV2D-10-201ENST00000520194 281 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SSX3Q99909 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
SSX3Q99909 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.53□□□□□ -1.68
SSX3Q99909 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX3Q99909 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX3Q99909 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
SSX3Q99909 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX3Q99909 HIRAP1-201ENST00000605318 787 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 PPATP2-201ENST00000605635 508 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AL023583.1-201ENST00000607518 1143 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AL353600.1-201ENST00000608148 251 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AP000864.1-201ENST00000609424 650 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AC009318.3-201ENST00000616916 503 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.53□□□□□ -1.68
SSX3Q99909 BMS1P21-201ENST00000634565 365 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX3Q99909 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX3Q99909 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 AC126323.6-202ENST00000568092 3511 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SSX3Q99909 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.53□□□□□ -1.68
SSX3Q99909 RARSP1-201ENST00000542842 1418 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.53□□□□□ -1.68
SSX3Q99909 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX3Q99909 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSX3Q99909 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SSX3Q99909 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 MAPK10-286ENST00000641208 8747 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX3Q99909 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
SSX3Q99909 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 RAD1P1-201ENST00000231383 813 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 OR52B1P-201ENST00000316506 909 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSX3Q99909 AC017079.1-201ENST00000333650 415 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 MIR551A-201ENST00000385042 96 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSX3Q99909 RNA5SP91-201ENST00000390902 119 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 RPL31P52-201ENST00000407532 367 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 RN7SKP59-201ENST00000410520 314 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AC019070.1-201ENST00000415008 1024 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.52□□□□□ -1.69
SSX3Q99909 GTF3AP1-201ENST00000416942 1004 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 MTND4P11-201ENST00000417020 1058 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 RNF10P1-201ENST00000418589 369 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 MTCO1P52-201ENST00000433928 531 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX3Q99909 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.52□□□□□ -1.69
SSX3Q99909 SPRYD7P1-201ENST00000443861 570 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AL450023.1-201ENST00000450868 751 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 MTND2P30-201ENST00000456663 382 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AC011225.1-201ENST00000457751 369 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AL133445.1-201ENST00000467051 452 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 RPS7P6-201ENST00000485777 579 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX3Q99909 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX3Q99909 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX3Q99909 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX3Q99909 IGKV2-18-201ENST00000522607 343 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX3Q99909 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX3Q99909 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.52□□□□□ -1.69
SSX3Q99909 AC004923.2-201ENST00000529649 369 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX3Q99909 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX3Q99909 AC063949.1-201ENST00000552900 865 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 HSPE1P2-201ENST00000554777 306 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AL049870.4-201ENST00000555741 486 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AC040958.1-201ENST00000561102 201 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 MIR4311-201ENST00000580794 100 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 MIR3176-201ENST00000582210 90 ntBASIC4.52□□□□□ -1.69
SSX3Q99909 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.52□□□□□ -1.69
SSX3Q99909 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms