Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
TOPBP1Q92547 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TOPBP1Q92547 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TOPBP1Q92547 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.66□□□□□ -1.18
TOPBP1Q92547 AL158163.1-201ENST00000603915 1649 ntBASIC7.66□□□□□ -1.18
TOPBP1Q92547 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TOPBP1Q92547 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TOPBP1Q92547 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TOPBP1Q92547 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.18
TOPBP1Q92547 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.18
TOPBP1Q92547 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TOPBP1Q92547 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TOPBP1Q92547 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.65□□□□□ -1.18
TOPBP1Q92547 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.65□□□□□ -1.18
TOPBP1Q92547 NPM1P18-201ENST00000434232 732 ntBASIC7.65□□□□□ -1.18
TOPBP1Q92547 AC079804.1-201ENST00000461922 436 ntBASIC7.65□□□□□ -1.18
TOPBP1Q92547 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC7.65□□□□□ -1.18
TOPBP1Q92547 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.65□□□□□ -1.18
TOPBP1Q92547 AC024220.1-201ENST00000603675 484 ntBASIC7.65□□□□□ -1.18
TOPBP1Q92547 AC005899.7-201ENST00000618199 588 ntBASIC7.65□□□□□ -1.18
TOPBP1Q92547 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC7.65□□□□□ -1.18
TOPBP1Q92547 MAPK10-349ENST00000641767 3661 ntBASIC7.65□□□□□ -1.18
TOPBP1Q92547 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TOPBP1Q92547 LINC00622-201ENST00000562811 1570 ntBASIC7.65□□□□□ -1.19
TOPBP1Q92547 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
TOPBP1Q92547 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC7.65□□□□□ -1.19
TOPBP1Q92547 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.19
TOPBP1Q92547 OR51H2P-202ENST00000641424 3046 ntBASIC7.65□□□□□ -1.19
TOPBP1Q92547 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TOPBP1Q92547 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.64□□□□□ -1.19
TOPBP1Q92547 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TOPBP1Q92547 RPL23AP2-201ENST00000471227 466 ntBASIC7.64□□□□□ -1.19
TOPBP1Q92547 AC091959.2-201ENST00000477363 321 ntBASIC7.64□□□□□ -1.19
TOPBP1Q92547 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.64□□□□□ -1.19
TOPBP1Q92547 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.64□□□□□ -1.19
TOPBP1Q92547 AC006065.6-201ENST00000625201 545 ntBASIC7.64□□□□□ -1.19
TOPBP1Q92547 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
TOPBP1Q92547 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.64□□□□□ -1.19
TOPBP1Q92547 AL592182.3-201ENST00000642132 3304 ntBASIC7.64□□□□□ -1.19
TOPBP1Q92547 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
TOPBP1Q92547 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC7.63□□□□□ -1.19
TOPBP1Q92547 LCMT1-AS2-202ENST00000565214 5666 ntBASIC7.63□□□□□ -1.19
TOPBP1Q92547 SNORA62.3-201ENST00000365110 153 ntBASIC7.63□□□□□ -1.19
TOPBP1Q92547 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC7.63□□□□□ -1.19
TOPBP1Q92547 RPL23AP83-201ENST00000434984 473 ntBASIC7.63□□□□□ -1.19
TOPBP1Q92547 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.63□□□□□ -1.19
TOPBP1Q92547 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 AC098799.3-201ENST00000506095 438 ntBASIC7.63□□□□□ -1.19
TOPBP1Q92547 RPL23AP53-201ENST00000521854 457 ntBASIC7.63□□□□□ -1.19
TOPBP1Q92547 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.63□□□□□ -1.19
TOPBP1Q92547 AL049830.4-201ENST00000555149 351 ntBASIC7.63□□□□□ -1.19
TOPBP1Q92547 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC7.63□□□□□ -1.19
TOPBP1Q92547 AC012442.3-202ENST00000636742 206 ntBASIC7.63□□□□□ -1.19
TOPBP1Q92547 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 AC106871.1-201ENST00000568324 3102 ntBASIC7.63□□□□□ -1.19
TOPBP1Q92547 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.63□□□□□ -1.19
TOPBP1Q92547 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC7.63□□□□□ -1.19
TOPBP1Q92547 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TOPBP1Q92547 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TOPBP1Q92547 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TOPBP1Q92547 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 RPL21P65-201ENST00000406094 466 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 RGS17P1-201ENST00000423358 553 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 RPL6P5-201ENST00000445678 828 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 ISCUP1-201ENST00000454451 448 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 uc_338.13-201ENST00000618243 179 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 TMEM30CP-203ENST00000637814 1035 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 AC239868.2-201ENST00000564237 4527 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TOPBP1Q92547 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TOPBP1Q92547 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 AL627171.1-201ENST00000618845 1308 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TOPBP1Q92547 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TOPBP1Q92547 MIR331-201ENST00000362302 94 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 5S_rRNA.1-201ENST00000364415 116 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TOPBP1Q92547 MTND4LP17-201ENST00000414607 293 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TOPBP1Q92547 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 AL935212.3-201ENST00000450729 284 ntBASIC7.62□□□□□ -1.19
TOPBP1Q92547 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC7.62□□□□□ -1.19
TOPBP1Q92547 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TOPBP1Q92547 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms