Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TM9SF4Q92544 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TM9SF4Q92544 THAP12P4-201ENST00000528321 2266 ntBASIC4.9□□□□□ -1.63
TM9SF4Q92544 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.9□□□□□ -1.63
TM9SF4Q92544 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.9□□□□□ -1.63
TM9SF4Q92544 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.9□□□□□ -1.63
TM9SF4Q92544 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.9□□□□□ -1.63
TM9SF4Q92544 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 MTCO1P15-201ENST00000529569 1526 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 OR4K17-201ENST00000315543 1032 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 SNORD51.1-201ENST00000365405 77 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 SNORA16A-201ENST00000384342 137 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 SNORA48.4-201ENST00000391089 134 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AL109941.1-201ENST00000401925 229 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 TRIM60P17-201ENST00000415181 719 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 DDX39BP1-205ENST00000422507 192 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 MTND4P24-201ENST00000424002 397 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 H2AFZP6-201ENST00000444403 394 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 ATP5G1P3-201ENST00000463301 410 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC090114.3-201ENST00000479267 829 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC083982.1-201ENST00000485679 344 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 RFPL4AP3-201ENST00000515267 345 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AP004607.2-201ENST00000533949 322 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 OR11J2P-201ENST00000555298 907 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC092868.3-201ENST00000560515 784 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC023158.1-201ENST00000561632 1025 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 AL158211.1-201ENST00000566763 763 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 ZNF92P2-201ENST00000600543 1059 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 KATNBL1P5-201ENST00000605015 517 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC018645.2-201ENST00000609151 472 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC009269.6-201ENST00000621778 588 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC079298.2-201ENST00000623885 459 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 AC009452.1-201ENST00000640823 606 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 TRIM51GP-201ENST00000534741 1350 ntBASIC4.89□□□□□ -1.63
TM9SF4Q92544 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TM9SF4Q92544 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TM9SF4Q92544 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF4Q92544 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF4Q92544 AC104623.2-202ENST00000623477 4002 ntBASIC4.88□□□□□ -1.63
TM9SF4Q92544 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF4Q92544 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF4Q92544 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF4Q92544 VN1R31P-201ENST00000417498 730 ntBASIC4.88□□□□□ -1.63
TM9SF4Q92544 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TM9SF4Q92544 MORF4L1P7-201ENST00000426038 703 ntBASIC4.88□□□□□ -1.63
TM9SF4Q92544 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 MTCYBP32-201ENST00000427945 1084 ntBASIC4.88□□□□□ -1.63
TM9SF4Q92544 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 MTCO1P45-201ENST00000431457 267 ntBASIC4.88□□□□□ -1.63
TM9SF4Q92544 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 Z99127.2-201ENST00000441426 334 ntBASIC4.88□□□□□ -1.63
TM9SF4Q92544 AC012512.1-201ENST00000446594 718 ntBASIC4.88□□□□□ -1.63
TM9SF4Q92544 TVP23BP2-201ENST00000455082 615 ntBASIC4.88□□□□□ -1.63
TM9SF4Q92544 EIF2S2P5-201ENST00000457635 968 ntBASIC4.88□□□□□ -1.63
TM9SF4Q92544 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.88□□□□□ -1.63
TM9SF4Q92544 RPS29P22-201ENST00000472363 168 ntBASIC4.88□□□□□ -1.63
TM9SF4Q92544 AP000797.2-201ENST00000475768 606 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms