Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 OR8G7P-201ENST00000616658 848 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 MIR6830-201ENST00000636015 70 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 DDX18P5-201ENST00000534547 1306 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC007998.4-201ENST00000612496 2533 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 RPS3AP23-201ENST00000401762 784 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 TMBIM7P-201ENST00000418074 855 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AF186996.5-201ENST00000418098 904 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AL158073.1-201ENST00000426848 1104 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 NRBF2P3-201ENST00000432731 865 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC122718.1-201ENST00000439448 744 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 FAM133DP-201ENST00000464802 691 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC063943.1-201ENST00000465434 453 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 RN7SKP276-201ENST00000516242 268 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC015804.1-201ENST00000622935 435 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC006453.5-201ENST00000636451 619 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AC025574.1-201ENST00000554784 1653 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 AC007382.1-201ENST00000624376 2618 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 SNORA84-201ENST00000459229 133 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 RN7SL244P-201ENST00000493405 297 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 AC025674.1-201ENST00000507074 324 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 HMGB3P16-201ENST00000508037 287 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 RNA5SP249-201ENST00000516127 99 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 RNU2-30P-201ENST00000516209 141 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 IGKV2D-10-201ENST00000520194 281 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 AC007224.1-201ENST00000564410 144 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 AC067959.1-201ENST00000604334 379 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 AC008758.3-201ENST00000507003 1829 ntBASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SHROOM3Q8TF72 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 SCARNA15-201ENST00000607520 4325 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 RNA5SP171-201ENST00000391071 115 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 SNORA11F-201ENST00000408237 128 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 SETP4-201ENST00000455717 868 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC007497.1-201ENST00000610421 561 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC022106.2-201ENST00000620114 757 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC008785.1-201ENST00000624475 456 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 SALL4P2-201ENST00000423288 2910 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 ZFRP1-201ENST00000457579 2970 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 MTCO1P15-201ENST00000529569 1526 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL359922.3-201ENST00000624779 1670 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms