Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC233702.9-201ENST00000581528 203 ntBASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 NPM1P45-201ENST00000583151 559 ntBASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 QTRT1P1-201ENST00000604344 1078 ntBASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 AL008729.2-201ENST00000606393 473 ntBASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 AC007497.1-201ENST00000610421 561 ntBASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 AC234782.5-201ENST00000617723 324 ntBASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 MAPK10-286ENST00000641208 8747 ntBASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 AC000123.3-201ENST00000624029 4975 ntBASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 NEAT1-202ENST00000501122 22743 ntBASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 AC104118.1-201ENST00000607625 1589 ntBASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.91□□□□□ -1.62
CDKL3Q8IVW4 CR788268.1-201ENST00000603931 1809 ntBASIC4.9□□□□□ -1.62
CDKL3Q8IVW4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.9□□□□□ -1.62
CDKL3Q8IVW4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDKL3Q8IVW4 ZFRP1-201ENST00000457579 2970 ntBASIC4.9□□□□□ -1.62
CDKL3Q8IVW4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDKL3Q8IVW4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDKL3Q8IVW4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 U3.30-201ENST00000391308 210 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 GTF3AP1-201ENST00000416942 1004 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 MTND6P18-201ENST00000439477 513 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC017007.3-201ENST00000479865 435 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 NIP7P2-201ENST00000485801 544 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 RNU1-6P-201ENST00000516290 144 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC133555.2-201ENST00000550213 292 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC079075.1-201ENST00000559543 878 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AL390726.5-202ENST00000564800 256 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC022726.1-201ENST00000587475 207 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 IMMP1LP1-201ENST00000605170 488 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC091905.4-201ENST00000623432 202 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC112694.2-201ENST00000623697 768 ntBASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
CDKL3Q8IVW4 AC126323.6-202ENST00000568092 3511 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 MAPK10-263ENST00000641052 4307 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 RNA5SP507-201ENST00000363603 121 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 RPL7P57-201ENST00000423238 740 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 AC112498.1-201ENST00000444401 332 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 TDGF1P1-201ENST00000445734 527 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 TRY2P-201ENST00000448860 689 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 snoU13.20-201ENST00000459180 104 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 AGGF1P3-201ENST00000493675 1213 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 GAPDHP56-201ENST00000506031 988 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 DUX4L52-201ENST00000549363 777 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 MIR5699-201ENST00000578903 90 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 AC011453.2-201ENST00000603737 729 ntBASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.89□□□□□ -1.63
CDKL3Q8IVW4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 AC007382.1-201ENST00000624376 2618 ntBASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CDKL3Q8IVW4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms