Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC090515.3-201ENST00000560431 315 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC123768.4-201ENST00000616244 701 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AL645927.2-201ENST00000618350 349 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 MIR6886-201ENST00000619864 61 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC135068.5-201ENST00000624197 983 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AP002371.2-201ENST00000624450 503 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AL049555.1-201ENST00000562834 1933 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 RNA5SP183-201ENST00000362452 119 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 SNORA5.1-201ENST00000384275 131 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 RNU6-185P-201ENST00000384421 107 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 RNA5SP339-201ENST00000390987 122 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 RNU6-244P-201ENST00000391028 104 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 RNA5SP241-201ENST00000391326 114 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 MIR1286-201ENST00000408112 78 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AL160175.1-201ENST00000428124 247 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AL606490.1-201ENST00000452266 765 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC011225.1-201ENST00000457751 369 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC010683.1-201ENST00000473673 378 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 RPEP1-201ENST00000504507 658 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC016559.2-201ENST00000510759 359 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 OR4R2P-201ENST00000530815 597 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 OR8G3P-201ENST00000533406 921 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC009852.2-201ENST00000567898 485 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC110743.1-201ENST00000584870 478 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AP000769.2-201ENST00000602344 396 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC009027.1-201ENST00000604510 479 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC005252.1-201ENST00000604518 1063 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC012557.1-201ENST00000607115 611 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC100847.1-201ENST00000611316 481 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AP006248.3-201ENST00000623580 594 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AP003400.3-201ENST00000624904 346 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC136428.4-201ENST00000634254 1155 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC104260.2-201ENST00000623551 3497 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC079298.1-201ENST00000625026 1619 ntBASIC4.94□□□□□ -1.62
NUP54Q7Z3B4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 RNU1-19P-201ENST00000363306 165 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AL353692.2-201ENST00000407054 335 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 RN7SKP229-201ENST00000410465 302 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms