Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RIF1Q5UIP0 OR8G2P-201ENST00000412796 908 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 HSFY1P1-201ENST00000423928 1178 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 DNAJA1P6-201ENST00000437347 354 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 AC007967.1-201ENST00000455422 1159 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 RPL23AP94-201ENST00000512518 302 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 HMGN1P9-201ENST00000515212 298 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 RPL21P12-201ENST00000559810 515 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 HNRNPCP4-201ENST00000571636 900 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 IPO5P1-202ENST00000600039 287 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 AL139124.1-201ENST00000609123 421 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 AC112484.5-201ENST00000624189 228 ntBASIC4.6□□□□□ -1.67
RIF1Q5UIP0 AC010300.1-201ENST00000600671 5134 ntBASIC4.59□□□□□ -1.67
RIF1Q5UIP0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 AC008079.2-201ENST00000623543 20396 ntBASIC4.59□□□□□ -1.67
RIF1Q5UIP0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 MT-RNR1-201ENST00000389680 954 ntBASIC4.59□□□□□ -1.67
RIF1Q5UIP0 U3.28-201ENST00000391249 210 ntBASIC4.59□□□□□ -1.67
RIF1Q5UIP0 ATP5HP3-201ENST00000396994 486 ntBASIC4.59□□□□□ -1.67
RIF1Q5UIP0 LRRC37BP1-201ENST00000398851 714 ntBASIC4.59□□□□□ -1.67
RIF1Q5UIP0 AC097374.1-203ENST00000400783 485 ntBASIC4.59□□□□□ -1.67
RIF1Q5UIP0 RNA5SP345-201ENST00000410646 108 ntBASIC4.59□□□□□ -1.67
RIF1Q5UIP0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 AL035246.1-201ENST00000433554 1255 ntBASIC4.59□□□□□ -1.67
RIF1Q5UIP0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RIF1Q5UIP0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RIF1Q5UIP0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
RIF1Q5UIP0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
RIF1Q5UIP0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.68
RIF1Q5UIP0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
RIF1Q5UIP0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RIF1Q5UIP0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.59□□□□□ -1.68
RIF1Q5UIP0 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 AC053481.1-201ENST00000467217 306 ntBASIC4.58□□□□□ -1.68
RIF1Q5UIP0 PAICSP4-201ENST00000517543 1253 ntBASIC4.58□□□□□ -1.68
RIF1Q5UIP0 AP000827.1-201ENST00000527814 258 ntBASIC4.58□□□□□ -1.68
RIF1Q5UIP0 AC040958.1-201ENST00000561102 201 ntBASIC4.58□□□□□ -1.68
RIF1Q5UIP0 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 AC012468.1-201ENST00000604888 430 ntBASIC4.58□□□□□ -1.68
RIF1Q5UIP0 AC015722.2-201ENST00000622210 551 ntBASIC4.58□□□□□ -1.68
RIF1Q5UIP0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 AC006042.3-201ENST00000454684 1469 ntBASIC4.58□□□□□ -1.68
RIF1Q5UIP0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RIF1Q5UIP0 CASC19-284ENST00000642142 1868 ntBASIC4.57□□□□□ -1.68
RIF1Q5UIP0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.57□□□□□ -1.68
RIF1Q5UIP0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RIF1Q5UIP0 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RIF1Q5UIP0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RIF1Q5UIP0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RIF1Q5UIP0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RIF1Q5UIP0 RNU1-130P-201ENST00000363930 160 ntBASIC4.57□□□□□ -1.68
RIF1Q5UIP0 AL451142.1-201ENST00000375867 775 ntBASIC4.57□□□□□ -1.68
RIF1Q5UIP0 TCEA1P4-201ENST00000415066 844 ntBASIC4.57□□□□□ -1.68
RIF1Q5UIP0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.57□□□□□ -1.68
RIF1Q5UIP0 AC018644.1-201ENST00000429934 551 ntBASIC4.57□□□□□ -1.68
RIF1Q5UIP0 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.57□□□□□ -1.68
RIF1Q5UIP0 AC236972.1-201ENST00000433225 199 ntBASIC4.57□□□□□ -1.68
RIF1Q5UIP0 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RIF1Q5UIP0 IGHVIII-13-1-201ENST00000517613 291 ntBASIC4.57□□□□□ -1.68
RIF1Q5UIP0 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms