Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
RC3H1Q5TC82 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AC135352.1-201ENST00000506173 1418 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 CASC19-206ENST00000641028 1430 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 OR4G11P-202ENST00000642116 1414 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AC007485.2-201ENST00000623493 1667 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 RNU6-1331P-201ENST00000363658 106 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 Y_RNA.296-201ENST00000364930 108 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 Y_RNA.302-201ENST00000364997 102 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 RNA5SP178-201ENST00000410380 128 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 RPS3AP9-201ENST00000417027 792 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 USP9YP27-201ENST00000418455 438 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AC019050.1-201ENST00000418508 492 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AIMP1P1-201ENST00000418670 937 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 RPL39P6-201ENST00000448289 150 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 PDSS1P2-201ENST00000449397 678 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AC092757.1-201ENST00000467293 467 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AC105918.1-201ENST00000474399 838 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 RN7SL561P-201ENST00000488553 281 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AC022206.1-201ENST00000495947 347 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 RPA2P1-201ENST00000556557 721 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 NPIPB1P-202ENST00000588786 828 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AL132765.2-201ENST00000610812 351 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AL442067.1-201ENST00000613261 223 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AC245014.3-201ENST00000618589 347 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AL512652.1-201ENST00000619006 500 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 OR1N1-202ENST00000619659 939 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 MIR3662-201ENST00000637030 95 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 RARSP1-201ENST00000542842 1418 ntBASIC8.12□□□□□ -1.11
RC3H1Q5TC82 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.12□□□□□ -1.11
RC3H1Q5TC82 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC007823.1-201ENST00000569932 1566 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 SNORA21-201ENST00000362423 132 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 Y_RNA.58-201ENST00000362807 102 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 Y_RNA.154-201ENST00000363624 102 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 RNU6-501P-201ENST00000364072 100 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 RNY3P1-201ENST00000365085 102 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 RNY3-201ENST00000365484 102 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 Y_RNA.431-201ENST00000384086 102 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 Y_RNA.490-201ENST00000384413 102 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC007066.1-201ENST00000392902 381 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 RPL17P12-201ENST00000413391 526 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 RPL26P29-201ENST00000415623 438 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 RPS7P14-201ENST00000426405 583 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 GPM6BP2-201ENST00000432046 144 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 FTH1P20-201ENST00000434913 548 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AL161636.2-201ENST00000445179 927 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 GPM6BP1-201ENST00000446387 144 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 RPL23AP35-201ENST00000451906 501 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AL590639.1-201ENST00000456484 337 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC022364.2-201ENST00000457963 554 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC011476.1-201ENST00000466725 307 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC022415.1-202ENST00000486612 523 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 RN7SL714P-201ENST00000487050 298 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 SSX8-201ENST00000506270 579 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms