Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AC003985.2-201ENST00000562268 1669 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AL442639.1-201ENST00000625030 1899 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 RNU4-39P-201ENST00000362455 127 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 OR51B3P-201ENST00000412287 913 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AC114755.2-201ENST00000413520 361 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 ATG4AP1-201ENST00000416893 538 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AC009480.2-201ENST00000422916 432 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AC092017.2-201ENST00000427600 362 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AL672167.3-201ENST00000465951 960 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 DEFB109A-201ENST00000482450 265 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AC104971.1-201ENST00000495117 578 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AP001804.2-201ENST00000533932 910 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AL110118.1-201ENST00000553543 400 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AC068831.4-201ENST00000556118 109 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AC116553.2-201ENST00000564203 463 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AC020915.5-201ENST00000596836 964 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AL137072.1-201ENST00000603444 466 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AL445423.1-201ENST00000609941 536 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 AL121873.1-201ENST00000616013 524 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 OR52H1-202ENST00000641796 1061 ntBASIC5.65□□□□□ -1.5
SHROOM1Q2M3G4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 DHX40P1-201ENST00000588725 1412 ntBASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHROOM1Q2M3G4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AC011447.7-201ENST00000624228 1590 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AC007618.1-201ENST00000366455 732 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AC098592.2-201ENST00000413158 265 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 RPS27AP7-201ENST00000422792 455 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 CHIAP3-201ENST00000423668 1133 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 CNOT7P1-201ENST00000429006 852 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AC097523.2-201ENST00000435551 652 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 OR52E3P-201ENST00000452083 936 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 FTH1P2-201ENST00000466086 412 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AC093267.1-201ENST00000489176 961 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AK3P4-201ENST00000504283 583 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AC025674.1-201ENST00000507074 324 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 PRELID3BP5-201ENST00000508612 460 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AC025423.2-201ENST00000537570 439 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AC115989.2-201ENST00000578640 563 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 AL031595.2-201ENST00000624215 19071 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 KARSP3-201ENST00000571212 1504 ntBASIC5.64□□□□□ -1.51
SHROOM1Q2M3G4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SHROOM1Q2M3G4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.63□□□□□ -1.51
SHROOM1Q2M3G4 TLK1P1-201ENST00000456760 2440 ntBASIC5.63□□□□□ -1.51
SHROOM1Q2M3G4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM1Q2M3G4 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SHROOM1Q2M3G4 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.63□□□□□ -1.51
SHROOM1Q2M3G4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.63□□□□□ -1.51
SHROOM1Q2M3G4 VTI1BP4-201ENST00000427516 527 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms