Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH12P55289 OR2AT2P-201ENST00000413438 905 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AL449283.1-202ENST00000418249 604 ntBASIC4.96□□□□□ -1.62
CDH12P55289 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH12P55289 RPL34P3-201ENST00000421454 338 ntBASIC4.96□□□□□ -1.62
CDH12P55289 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.96□□□□□ -1.62
CDH12P55289 XKRYP1-201ENST00000423438 492 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.96□□□□□ -1.62
CDH12P55289 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH12P55289 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH12P55289 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH12P55289 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH12P55289 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH12P55289 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH12P55289 CETN4P-201ENST00000432407 469 ntBASIC4.96□□□□□ -1.62
CDH12P55289 XKRYP2-201ENST00000432915 492 ntBASIC4.96□□□□□ -1.62
CDH12P55289 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH12P55289 FMO7P-201ENST00000436045 768 ntBASIC4.96□□□□□ -1.62
CDH12P55289 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.96□□□□□ -1.62
CDH12P55289 GAPDHP14-201ENST00000450472 937 ntBASIC4.96□□□□□ -1.62
CDH12P55289 PSMC1P13-201ENST00000458195 985 ntBASIC4.96□□□□□ -1.62
CDH12P55289 METTL15P1-201ENST00000481421 1045 ntBASIC4.96□□□□□ -1.62
CDH12P55289 RN7SL273P-201ENST00000481561 299 ntBASIC4.96□□□□□ -1.62
CDH12P55289 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CDH12P55289 RPL15P21-201ENST00000495592 567 ntBASIC4.96□□□□□ -1.62
CDH12P55289 PFN1P8-201ENST00000497012 543 ntBASIC4.96□□□□□ -1.62
CDH12P55289 MTCYBP35-201ENST00000503630 1137 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AC026414.1-201ENST00000504046 698 ntBASIC4.96□□□□□ -1.62
CDH12P55289 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH12P55289 AC093534.1-201ENST00000504977 132 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.96□□□□□ -1.62
CDH12P55289 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH12P55289 MTND6P2-201ENST00000512226 524 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH12P55289 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH12P55289 AC020937.1-201ENST00000519677 1013 ntBASIC4.96□□□□□ -1.62
CDH12P55289 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 DUX4L52-201ENST00000549363 777 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.96□□□□□ -1.62
CDH12P55289 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH12P55289 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH12P55289 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH12P55289 AC012616.1-201ENST00000600294 197 ntBASIC4.96□□□□□ -1.62
CDH12P55289 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH12P55289 Z82195.1-201ENST00000604558 398 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AL118522.2-201ENST00000616045 615 ntBASIC4.96□□□□□ -1.62
CDH12P55289 OR8G7P-201ENST00000616658 848 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AC109583.2-201ENST00000617367 129 ntBASIC4.96□□□□□ -1.62
CDH12P55289 MIR6839-201ENST00000620425 113 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AC004232.3-201ENST00000622977 525 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AP003400.3-201ENST00000624904 346 ntBASIC4.96□□□□□ -1.62
CDH12P55289 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH12P55289 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH12P55289 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 MFSD8-220ENST00000641243 1422 ntBASIC4.96□□□□□ -1.62
CDH12P55289 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH12P55289 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH12P55289 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
CDH12P55289 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 SMG1P7-201ENST00000565246 2704 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH12P55289 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CDH12P55289 CASC19-281ENST00000642118 1554 ntBASIC4.95□□□□□ -1.62
CDH12P55289 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDH12P55289 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH12P55289 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH12P55289 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDH12P55289 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH12P55289 RNA5SP46-201ENST00000362370 120 ntBASIC4.95□□□□□ -1.62
CDH12P55289 RNU6-1263P-201ENST00000384601 106 ntBASIC4.95□□□□□ -1.62
CDH12P55289 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH12P55289 RPS3P2-201ENST00000421346 701 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH12P55289 AC092648.1-201ENST00000425870 423 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AC124944.2-201ENST00000429866 1242 ntBASIC4.95□□□□□ -1.62
CDH12P55289 SUMO2P3-201ENST00000438311 288 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH12P55289 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH12P55289 AC019185.1-201ENST00000442718 389 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH12P55289 RN7SL72P-201ENST00000460697 269 ntBASIC4.95□□□□□ -1.62
CDH12P55289 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH12P55289 MTCO2P6-201ENST00000463134 685 ntBASIC4.95□□□□□ -1.62
CDH12P55289 NDUFA5P5-201ENST00000468361 342 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AC022133.1-201ENST00000490961 571 ntBASIC4.95□□□□□ -1.62
CDH12P55289 NIFKP7-201ENST00000503365 834 ntBASIC4.95□□□□□ -1.62
CDH12P55289 NRBF2P4-201ENST00000520874 850 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms