Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SNORD116-1-201ENST00000384335 95 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 NACAP7-201ENST00000407371 609 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 LIPT1P1-201ENST00000415870 1186 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 AL158050.1-201ENST00000416077 457 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 ARAFP1-201ENST00000422172 605 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 OR52B5P-201ENST00000435337 951 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 CNOT7P2-201ENST00000441051 832 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 OR10R1P-201ENST00000441524 1141 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 VN1R25P-201ENST00000443385 738 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 MTND6P5-201ENST00000448266 512 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 TPT1P1-201ENST00000458495 518 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 NAP1L1P3-201ENST00000462291 880 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 RN7SL515P-201ENST00000463999 297 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 AC016687.1-201ENST00000482574 353 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CACNA2D1P54289 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 MTND4P2-201ENST00000507767 1203 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 HMGB1P44-201ENST00000508597 572 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 AL117351.2-201ENST00000513571 157 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 SCARNA16.4-201ENST00000516956 187 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 RNA5SP373-201ENST00000517271 95 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 OR10V3P-201ENST00000525712 725 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 EIF1P5-201ENST00000585002 234 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 VN1R78P-201ENST00000597393 564 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 OR52B5P-202ENST00000641118 1110 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 BX649567.1-201ENST00000642071 1134 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CACNA2D1P54289 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CACNA2D1P54289 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CACNA2D1P54289 AC109780.1-201ENST00000451768 1344 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 AL359715.3-201ENST00000569267 2123 ntBASIC5.71□□□□□ -1.5
CACNA2D1P54289 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
CACNA2D1P54289 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CACNA2D1P54289 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 AL590763.1-201ENST00000398297 1545 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC008549.2-201ENST00000333482 706 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 U3.7-201ENST00000363668 216 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 MIR513B-201ENST00000385136 84 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 GPS2P1-201ENST00000411761 986 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 USP9YP24-201ENST00000434374 697 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 CR769776.1-201ENST00000441254 787 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 USP9YP17-201ENST00000444617 696 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AL672138.1-201ENST00000450604 1015 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 HMGB1P26-201ENST00000452520 628 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC092155.2-201ENST00000454675 477 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC005532.2-201ENST00000467154 373 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 RN7SL222P-201ENST00000476452 299 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 OR2AO1P-201ENST00000476497 403 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC058823.1-201ENST00000485315 474 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC072052.1-201ENST00000496556 306 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 HIGD1AP14-201ENST00000507617 282 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC091912.1-201ENST00000511351 248 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 Y_RNA.655-201ENST00000515919 96 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 SEC11B-201ENST00000518383 499 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 HMGB1P40-201ENST00000525121 540 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 ZNF321P-202ENST00000550843 495 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms