Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK1P53667 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK1P53667 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.26□□□□□ -1.57
LIMK1P53667 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK1P53667 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.26□□□□□ -1.57
LIMK1P53667 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
LIMK1P53667 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK1P53667 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
LIMK1P53667 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LIMK1P53667 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK1P53667 AC068538.1-201ENST00000376856 336 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 SNORA16A-201ENST00000384342 137 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 RNA5SP91-201ENST00000390902 119 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.26□□□□□ -1.57
LIMK1P53667 EIF4A1P3-201ENST00000411521 244 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 OR2AM1P-201ENST00000422137 422 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.26□□□□□ -1.57
LIMK1P53667 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.26□□□□□ -1.57
LIMK1P53667 AC046176.1-201ENST00000435260 1170 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 CACYBPP1-201ENST00000438592 684 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.26□□□□□ -1.57
LIMK1P53667 MTCO3P43-201ENST00000440974 771 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 AL596266.1-201ENST00000448132 400 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 AL627224.1-201ENST00000448334 444 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 AC092647.2-201ENST00000452998 253 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.26□□□□□ -1.57
LIMK1P53667 MTND2P31-201ENST00000512602 616 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.26□□□□□ -1.57
LIMK1P53667 AC034205.1-201ENST00000520621 638 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.26□□□□□ -1.57
LIMK1P53667 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.26□□□□□ -1.57
LIMK1P53667 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.26□□□□□ -1.57
LIMK1P53667 AC005520.3-201ENST00000602874 370 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 AC123786.2-201ENST00000603459 275 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 AC145207.9-201ENST00000623802 325 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.26□□□□□ -1.57
LIMK1P53667 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.26□□□□□ -1.57
LIMK1P53667 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK1P53667 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.26□□□□□ -1.57
LIMK1P53667 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK1P53667 AC005005.4-201ENST00000623789 16698 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.26□□□□□ -1.57
LIMK1P53667 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
LIMK1P53667 AL591135.1-201ENST00000401578 5914 ntBASIC5.26□□□□□ -1.57
LIMK1P53667 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LIMK1P53667 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
LIMK1P53667 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LIMK1P53667 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
LIMK1P53667 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
LIMK1P53667 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.25□□□□□ -1.57
LIMK1P53667 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
LIMK1P53667 AC009229.4-201ENST00000623854 1947 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 AC021242.1-201ENST00000507315 2035 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.25□□□□□ -1.57
LIMK1P53667 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LIMK1P53667 RPL11P3-201ENST00000395256 523 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 GJA6P-201ENST00000415117 1042 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.25□□□□□ -1.57
LIMK1P53667 BTF3P9-201ENST00000418784 283 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.25□□□□□ -1.57
LIMK1P53667 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 FAR1P1-201ENST00000427163 934 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 AL606490.7-201ENST00000433136 191 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 Z99127.2-201ENST00000441426 334 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.25□□□□□ -1.57
LIMK1P53667 AC073264.2-201ENST00000448886 166 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.25□□□□□ -1.57
LIMK1P53667 AP000942.1-201ENST00000463969 747 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 CCDC75P1-201ENST00000469247 791 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.25□□□□□ -1.57
LIMK1P53667 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.25□□□□□ -1.57
LIMK1P53667 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.25□□□□□ -1.57
LIMK1P53667 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.25□□□□□ -1.57
LIMK1P53667 GTF2F2P1-201ENST00000511083 675 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 PMS2P3-207ENST00000529061 717 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 AC134349.2-201ENST00000535136 910 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 AP006289.1-201ENST00000538089 277 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LIMK1P53667 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.25□□□□□ -1.57
LIMK1P53667 AC005021.1-201ENST00000608730 355 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 AC010632.3-201ENST00000611377 369 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 AC092159.4-201ENST00000624944 550 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.25□□□□□ -1.57
LIMK1P53667 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.25□□□□□ -1.57
LIMK1P53667 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIMK1P53667 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.25□□□□□ -1.57
LIMK1P53667 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms