Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP98P52948 RNA5SP315-201ENST00000516340 116 ntBASIC5.67□□□□□ -1.5
NUP98P52948 RNA5SP312-201ENST00000517068 116 ntBASIC5.67□□□□□ -1.5
NUP98P52948 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP98P52948 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NUP98P52948 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP98P52948 NPM1P5-201ENST00000557228 838 ntBASIC5.67□□□□□ -1.5
NUP98P52948 MIR4660-201ENST00000583549 74 ntBASIC5.67□□□□□ -1.5
NUP98P52948 AL109618.2-201ENST00000605527 211 ntBASIC5.67□□□□□ -1.5
NUP98P52948 AL392048.1-201ENST00000613946 534 ntBASIC5.67□□□□□ -1.5
NUP98P52948 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.67□□□□□ -1.5
NUP98P52948 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP98P52948 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NUP98P52948 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NUP98P52948 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP98P52948 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP98P52948 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP98P52948 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP98P52948 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NUP98P52948 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP98P52948 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NUP98P52948 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NUP98P52948 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP98P52948 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP98P52948 Z98745.1-201ENST00000402553 494 ntBASIC5.67□□□□□ -1.5
NUP98P52948 AL139095.3-201ENST00000419672 1203 ntBASIC5.67□□□□□ -1.5
NUP98P52948 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.67□□□□□ -1.5
NUP98P52948 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.67□□□□□ -1.5
NUP98P52948 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP98P52948 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.67□□□□□ -1.5
NUP98P52948 MIR1254-2-201ENST00000579553 63 ntBASIC5.67□□□□□ -1.5
NUP98P52948 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.67□□□□□ -1.5
NUP98P52948 AC130352.1-201ENST00000602979 661 ntBASIC5.67□□□□□ -1.5
NUP98P52948 ARF4P1-201ENST00000605447 541 ntBASIC5.67□□□□□ -1.5
NUP98P52948 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP98P52948 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP98P52948 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
NUP98P52948 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP98P52948 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NUP98P52948 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.66□□□□□ -1.5
NUP98P52948 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NUP98P52948 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP98P52948 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
NUP98P52948 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP98P52948 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP98P52948 UBBP2-201ENST00000376781 231 ntBASIC5.66□□□□□ -1.5
NUP98P52948 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.66□□□□□ -1.5
NUP98P52948 RPL21P91-201ENST00000429231 479 ntBASIC5.66□□□□□ -1.5
NUP98P52948 KCTD10P1-201ENST00000434203 625 ntBASIC5.66□□□□□ -1.5
NUP98P52948 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.66□□□□□ -1.5
NUP98P52948 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.66□□□□□ -1.5
NUP98P52948 RN7SL810P-201ENST00000493031 276 ntBASIC5.66□□□□□ -1.5
NUP98P52948 AP000827.1-201ENST00000527814 258 ntBASIC5.66□□□□□ -1.5
NUP98P52948 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP98P52948 AC021483.2-201ENST00000567415 758 ntBASIC5.66□□□□□ -1.5
NUP98P52948 SS18L2P2-201ENST00000583960 235 ntBASIC5.66□□□□□ -1.5
NUP98P52948 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP98P52948 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP98P52948 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP98P52948 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP98P52948 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP98P52948 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
NUP98P52948 AC100778.3-201ENST00000580060 1750 ntBASIC5.66□□□□□ -1.5
NUP98P52948 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP98P52948 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.65□□□□□ -1.5
NUP98P52948 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP98P52948 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NUP98P52948 SNORA11F-201ENST00000408237 128 ntBASIC5.65□□□□□ -1.5
NUP98P52948 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP98P52948 OR8G2P-201ENST00000412796 908 ntBASIC5.65□□□□□ -1.5
NUP98P52948 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP98P52948 AC011998.1-201ENST00000433403 117 ntBASIC5.65□□□□□ -1.5
NUP98P52948 AL157385.1-201ENST00000446973 268 ntBASIC5.65□□□□□ -1.5
NUP98P52948 AL359073.1-201ENST00000448036 403 ntBASIC5.65□□□□□ -1.5
NUP98P52948 AC009963.2-201ENST00000453431 138 ntBASIC5.65□□□□□ -1.5
NUP98P52948 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.65□□□□□ -1.5
NUP98P52948 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP98P52948 AC084824.1-201ENST00000550917 1005 ntBASIC5.65□□□□□ -1.5
NUP98P52948 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.65□□□□□ -1.5
NUP98P52948 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP98P52948 AC006065.6-201ENST00000625201 545 ntBASIC5.65□□□□□ -1.5
NUP98P52948 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
NUP98P52948 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP98P52948 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
NUP98P52948 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP98P52948 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
NUP98P52948 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUP98P52948 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
NUP98P52948 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUP98P52948 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUP98P52948 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.51
NUP98P52948 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUP98P52948 OR5P1P-201ENST00000299512 925 ntBASIC5.64□□□□□ -1.51
NUP98P52948 RNU1-63P-201ENST00000383902 164 ntBASIC5.64□□□□□ -1.51
NUP98P52948 AC009506.2-201ENST00000420635 840 ntBASIC5.64□□□□□ -1.51
NUP98P52948 COX6CP15-201ENST00000426313 211 ntBASIC5.64□□□□□ -1.51
NUP98P52948 AL935212.3-201ENST00000450729 284 ntBASIC5.64□□□□□ -1.51
NUP98P52948 AC008958.1-201ENST00000511047 682 ntBASIC5.64□□□□□ -1.51
NUP98P52948 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP98P52948 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms