Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MSH6P52701 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.62□□□□□ -1.35
MSH6P52701 AC091979.2-201ENST00000607514 214 ntBASIC6.62□□□□□ -1.35
MSH6P52701 SNX18P1Y-201ENST00000616231 511 ntBASIC6.62□□□□□ -1.35
MSH6P52701 AC112200.1-201ENST00000625015 234 ntBASIC6.62□□□□□ -1.35
MSH6P52701 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MSH6P52701 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.62□□□□□ -1.35
MSH6P52701 A2MP1-204ENST00000566278 4130 ntBASIC6.62□□□□□ -1.35
MSH6P52701 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.62□□□□□ -1.35
MSH6P52701 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MSH6P52701 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.62□□□□□ -1.35
MSH6P52701 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MSH6P52701 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MSH6P52701 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MSH6P52701 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MSH6P52701 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
MSH6P52701 SNORA73.1-201ENST00000363107 205 ntBASIC6.61□□□□□ -1.35
MSH6P52701 AL022722.2-201ENST00000402519 180 ntBASIC6.61□□□□□ -1.35
MSH6P52701 AC009506.2-201ENST00000420635 840 ntBASIC6.61□□□□□ -1.35
MSH6P52701 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.61□□□□□ -1.35
MSH6P52701 YWHAZP2-201ENST00000440317 728 ntBASIC6.61□□□□□ -1.35
MSH6P52701 VN1R34P-201ENST00000447387 883 ntBASIC6.61□□□□□ -1.35
MSH6P52701 RN7SL542P-201ENST00000467147 294 ntBASIC6.61□□□□□ -1.35
MSH6P52701 RN7SL810P-201ENST00000493031 276 ntBASIC6.61□□□□□ -1.35
MSH6P52701 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MSH6P52701 AC097486.1-201ENST00000515331 210 ntBASIC6.61□□□□□ -1.35
MSH6P52701 AC023632.4-201ENST00000517783 191 ntBASIC6.61□□□□□ -1.35
MSH6P52701 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.61□□□□□ -1.35
MSH6P52701 AC027369.5-201ENST00000533838 755 ntBASIC6.61□□□□□ -1.35
MSH6P52701 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MSH6P52701 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.61□□□□□ -1.35
MSH6P52701 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.61□□□□□ -1.35
MSH6P52701 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.61□□□□□ -1.35
MSH6P52701 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.61□□□□□ -1.35
MSH6P52701 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.61□□□□□ -1.35
MSH6P52701 AC099676.1-201ENST00000608886 657 ntBASIC6.61□□□□□ -1.35
MSH6P52701 MIR492-201ENST00000638676 116 ntBASIC6.61□□□□□ -1.35
MSH6P52701 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MSH6P52701 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MSH6P52701 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
MSH6P52701 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MSH6P52701 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.61□□□□□ -1.35
MSH6P52701 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MSH6P52701 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MSH6P52701 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
MSH6P52701 AP000473.2-201ENST00000602659 1537 ntBASIC6.61□□□□□ -1.35
MSH6P52701 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MSH6P52701 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MSH6P52701 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MSH6P52701 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MSH6P52701 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
MSH6P52701 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MSH6P52701 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
MSH6P52701 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
MSH6P52701 RNU6-761P-201ENST00000384148 107 ntBASIC6.6□□□□□ -1.35
MSH6P52701 PPIAP31-201ENST00000405422 495 ntBASIC6.6□□□□□ -1.35
MSH6P52701 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.6□□□□□ -1.35
MSH6P52701 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.6□□□□□ -1.35
MSH6P52701 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.6□□□□□ -1.35
MSH6P52701 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.6□□□□□ -1.35
MSH6P52701 UQCRHP4-201ENST00000471686 272 ntBASIC6.6□□□□□ -1.35
MSH6P52701 RPL36AP41-201ENST00000493820 306 ntBASIC6.6□□□□□ -1.35
MSH6P52701 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.6□□□□□ -1.35
MSH6P52701 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.6□□□□□ -1.35
MSH6P52701 MTCYBP13-201ENST00000578634 1093 ntBASIC6.6□□□□□ -1.35
MSH6P52701 AC108359.1-201ENST00000616451 1211 ntBASIC6.6□□□□□ -1.35
MSH6P52701 AC026367.3-201ENST00000619032 590 ntBASIC6.6□□□□□ -1.35
MSH6P52701 TLK1P1-201ENST00000456760 2440 ntBASIC6.6□□□□□ -1.35
MSH6P52701 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MSH6P52701 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.6□□□□□ -1.35
MSH6P52701 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.6□□□□□ -1.35
MSH6P52701 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
MSH6P52701 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.6□□□□□ -1.35
MSH6P52701 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.6□□□□□ -1.35
MSH6P52701 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.59□□□□□ -1.35
MSH6P52701 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.59□□□□□ -1.35
MSH6P52701 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.59□□□□□ -1.35
MSH6P52701 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MSH6P52701 U3.32-201ENST00000408116 212 ntBASIC6.59□□□□□ -1.35
MSH6P52701 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.59□□□□□ -1.35
MSH6P52701 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.59□□□□□ -1.35
MSH6P52701 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MSH6P52701 AL132765.1-201ENST00000434165 553 ntBASIC6.59□□□□□ -1.35
MSH6P52701 AC046176.1-201ENST00000435260 1170 ntBASIC6.59□□□□□ -1.35
MSH6P52701 AC079168.2-201ENST00000453977 416 ntBASIC6.59□□□□□ -1.35
MSH6P52701 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.59□□□□□ -1.35
MSH6P52701 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MSH6P52701 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.59□□□□□ -1.35
MSH6P52701 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.59□□□□□ -1.35
MSH6P52701 AL356863.1-201ENST00000623378 1080 ntBASIC6.59□□□□□ -1.35
MSH6P52701 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
MSH6P52701 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MSH6P52701 AC090220.1-201ENST00000593078 1699 ntBASIC6.59□□□□□ -1.35
MSH6P52701 AC125257.1-201ENST00000560400 2930 ntBASIC6.59□□□□□ -1.35
MSH6P52701 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MSH6P52701 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
MSH6P52701 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.59□□□□□ -1.35
MSH6P52701 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MSH6P52701 AP001029.2-203ENST00000589795 4910 ntBASIC6.59□□□□□ -1.35
MSH6P52701 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms