Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
NEK3P51956 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.78□□□□□ -1.48
NEK3P51956 AC124856.1-201ENST00000600819 896 ntBASIC5.78□□□□□ -1.48
NEK3P51956 FO393422.1-201ENST00000603908 708 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AC073387.2-201ENST00000604797 784 ntBASIC5.78□□□□□ -1.48
NEK3P51956 BNIP3P4-201ENST00000604946 565 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AL122125.1-201ENST00000616999 600 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.78□□□□□ -1.48
NEK3P51956 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 AL035661.1-201ENST00000620459 1144 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.78□□□□□ -1.48
NEK3P51956 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.78□□□□□ -1.48
NEK3P51956 CR392039.4-201ENST00000624968 501 ntBASIC5.78□□□□□ -1.48
NEK3P51956 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
NEK3P51956 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 MTCO1P11-201ENST00000429111 1528 ntBASIC5.78□□□□□ -1.48
NEK3P51956 AC106754.1-201ENST00000562632 1513 ntBASIC5.78□□□□□ -1.48
NEK3P51956 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEK3P51956 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.77□□□□□ -1.48
NEK3P51956 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.77□□□□□ -1.48
NEK3P51956 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.48
NEK3P51956 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.77□□□□□ -1.49
NEK3P51956 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 AC104446.1-201ENST00000613728 1321 ntBASIC5.77□□□□□ -1.49
NEK3P51956 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.77□□□□□ -1.49
NEK3P51956 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NEK3P51956 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 ANKRD36P1-201ENST00000344424 659 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.77□□□□□ -1.49
NEK3P51956 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 U3.25-201ENST00000391209 220 ntBASIC5.77□□□□□ -1.49
NEK3P51956 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 RNU6-603P-201ENST00000411403 107 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AC092638.1-201ENST00000411966 1275 ntBASIC5.77□□□□□ -1.49
NEK3P51956 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.77□□□□□ -1.49
NEK3P51956 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.77□□□□□ -1.49
NEK3P51956 DYNLL1P7-201ENST00000429273 258 ntBASIC5.77□□□□□ -1.49
NEK3P51956 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
NEK3P51956 AC092106.1-201ENST00000444291 373 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AC005297.1-201ENST00000444765 862 ntBASIC5.77□□□□□ -1.49
NEK3P51956 YWHAQP9-201ENST00000445891 512 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AC073909.1-201ENST00000447112 999 ntBASIC5.77□□□□□ -1.49
NEK3P51956 OR7E116P-201ENST00000448529 957 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AL606490.1-201ENST00000452266 765 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.77□□□□□ -1.49
NEK3P51956 BX248409.1-201ENST00000455497 255 ntBASIC5.77□□□□□ -1.49
NEK3P51956 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.77□□□□□ -1.49
NEK3P51956 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
NEK3P51956 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.77□□□□□ -1.49
NEK3P51956 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.77□□□□□ -1.49
NEK3P51956 AC074087.1-201ENST00000512059 724 ntBASIC5.77□□□□□ -1.49
NEK3P51956 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.77□□□□□ -1.49
NEK3P51956 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.77□□□□□ -1.49
NEK3P51956 MRPS16P1-201ENST00000523462 412 ntBASIC5.77□□□□□ -1.49
NEK3P51956 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.77□□□□□ -1.49
NEK3P51956 OR8I1P-201ENST00000529291 931 ntBASIC5.77□□□□□ -1.49
NEK3P51956 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.77□□□□□ -1.49
NEK3P51956 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.77□□□□□ -1.49
NEK3P51956 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.77□□□□□ -1.49
NEK3P51956 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.77□□□□□ -1.49
NEK3P51956 AC096996.1-201ENST00000563813 325 ntBASIC5.77□□□□□ -1.49
NEK3P51956 MIR4509-3-201ENST00000578671 94 ntBASIC5.77□□□□□ -1.49
NEK3P51956 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.77□□□□□ -1.49
NEK3P51956 MIR4509-2-201ENST00000583920 94 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.77□□□□□ -1.49
NEK3P51956 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 AC104695.2-201ENST00000605056 775 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AC090607.5-201ENST00000615692 224 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 MIR4509-1-201ENST00000618224 94 ntBASIC5.77□□□□□ -1.49
NEK3P51956 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.77□□□□□ -1.49
NEK3P51956 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.77□□□□□ -1.49
NEK3P51956 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 ATE1-AS1-202ENST00000636460 506 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AC134882.1-201ENST00000603738 1676 ntBASIC5.77□□□□□ -1.49
NEK3P51956 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.77□□□□□ -1.49
NEK3P51956 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.77□□□□□ -1.49
NEK3P51956 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 AC007938.2-201ENST00000604666 2634 ntBASIC5.77□□□□□ -1.49
NEK3P51956 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NEK3P51956 AC093849.1-201ENST00000563631 2209 ntBASIC5.76□□□□□ -1.49
NEK3P51956 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 AC010266.2-201ENST00000564741 3255 ntBASIC5.76□□□□□ -1.49
NEK3P51956 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
NEK3P51956 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 6.8 ms