Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RPS18P6-201ENST00000476880 458 ntBASIC5.3□□□□□ -1.56
SSR1P43307 AC117394.1-201ENST00000477323 567 ntBASIC5.3□□□□□ -1.56
SSR1P43307 UBA52P7-201ENST00000486088 380 ntBASIC5.3□□□□□ -1.56
SSR1P43307 RNU6-943P-201ENST00000516960 98 ntBASIC5.3□□□□□ -1.56
SSR1P43307 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.3□□□□□ -1.56
SSR1P43307 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.3□□□□□ -1.56
SSR1P43307 IGKV2-18-201ENST00000522607 343 ntBASIC5.3□□□□□ -1.56
SSR1P43307 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.3□□□□□ -1.56
SSR1P43307 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.3□□□□□ -1.56
SSR1P43307 AP000864.1-201ENST00000609424 650 ntBASIC5.3□□□□□ -1.56
SSR1P43307 RPSAP73-201ENST00000614820 330 ntBASIC5.3□□□□□ -1.56
SSR1P43307 AL035461.2-201ENST00000619201 524 ntBASIC5.3□□□□□ -1.56
SSR1P43307 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SSR1P43307 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSR1P43307 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSR1P43307 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSR1P43307 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.3□□□□□ -1.56
SSR1P43307 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.3□□□□□ -1.56
SSR1P43307 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSR1P43307 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SSR1P43307 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSR1P43307 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSR1P43307 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.29□□□□□ -1.56
SSR1P43307 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.29□□□□□ -1.56
SSR1P43307 NUDT19P3-201ENST00000404698 555 ntBASIC5.29□□□□□ -1.56
SSR1P43307 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSR1P43307 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.29□□□□□ -1.56
SSR1P43307 OR2AH1P-201ENST00000425717 928 ntBASIC5.29□□□□□ -1.56
SSR1P43307 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.29□□□□□ -1.56
SSR1P43307 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.29□□□□□ -1.56
SSR1P43307 RPL35AP21-201ENST00000437667 333 ntBASIC5.29□□□□□ -1.56
SSR1P43307 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.29□□□□□ -1.56
SSR1P43307 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.29□□□□□ -1.56
SSR1P43307 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.29□□□□□ -1.56
SSR1P43307 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.29□□□□□ -1.56
SSR1P43307 GLRXP2-201ENST00000555594 321 ntBASIC5.29□□□□□ -1.56
SSR1P43307 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.29□□□□□ -1.56
SSR1P43307 AC018552.3-201ENST00000567416 561 ntBASIC5.29□□□□□ -1.56
SSR1P43307 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSR1P43307 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.29□□□□□ -1.56
SSR1P43307 AC126915.2-201ENST00000610957 190 ntBASIC5.29□□□□□ -1.56
SSR1P43307 AC078899.5-201ENST00000612475 178 ntBASIC5.29□□□□□ -1.56
SSR1P43307 AC090527.3-201ENST00000619041 548 ntBASIC5.29□□□□□ -1.56
SSR1P43307 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.29□□□□□ -1.56
SSR1P43307 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
SSR1P43307 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SSR1P43307 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSR1P43307 AC093311.1-201ENST00000506586 2021 ntBASIC5.29□□□□□ -1.56
SSR1P43307 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSR1P43307 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.29□□□□□ -1.56
SSR1P43307 PHKBP1-201ENST00000450951 1951 ntBASIC5.29□□□□□ -1.56
SSR1P43307 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.29□□□□□ -1.56
SSR1P43307 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.29□□□□□ -1.56
SSR1P43307 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSR1P43307 AL133412.1-201ENST00000380194 2992 ntBASIC5.28□□□□□ -1.56
SSR1P43307 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSR1P43307 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSR1P43307 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SSR1P43307 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.28□□□□□ -1.56
SSR1P43307 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.28□□□□□ -1.56
SSR1P43307 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSR1P43307 AC139713.2-215ENST00000641428 5037 ntBASIC5.28□□□□□ -1.56
SSR1P43307 SNORA17.1-201ENST00000362945 126 ntBASIC5.28□□□□□ -1.56
SSR1P43307 U3.2-201ENST00000362981 210 ntBASIC5.28□□□□□ -1.56
SSR1P43307 RNA5SP435-201ENST00000364044 108 ntBASIC5.28□□□□□ -1.56
SSR1P43307 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.28□□□□□ -1.56
SSR1P43307 AL512422.1-201ENST00000407033 553 ntBASIC5.28□□□□□ -1.56
SSR1P43307 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.28□□□□□ -1.56
SSR1P43307 CHEK2P5-201ENST00000423877 246 ntBASIC5.28□□□□□ -1.56
SSR1P43307 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.28□□□□□ -1.56
SSR1P43307 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.28□□□□□ -1.56
SSR1P43307 BX323845.1-201ENST00000432417 179 ntBASIC5.28□□□□□ -1.56
SSR1P43307 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.28□□□□□ -1.56
SSR1P43307 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.28□□□□□ -1.56
SSR1P43307 AC069285.2-201ENST00000440210 275 ntBASIC5.28□□□□□ -1.56
SSR1P43307 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.28□□□□□ -1.56
SSR1P43307 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.28□□□□□ -1.56
SSR1P43307 SCARNA10-201ENST00000459255 330 ntBASIC5.28□□□□□ -1.56
SSR1P43307 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSR1P43307 RPS21P4-201ENST00000487122 248 ntBASIC5.28□□□□□ -1.56
SSR1P43307 RN7SL101P-201ENST00000496350 279 ntBASIC5.28□□□□□ -1.56
SSR1P43307 AC024558.1-201ENST00000505008 528 ntBASIC5.28□□□□□ -1.56
SSR1P43307 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.28□□□□□ -1.56
SSR1P43307 AC106872.4-201ENST00000510050 523 ntBASIC5.28□□□□□ -1.56
SSR1P43307 MYL12AP1-201ENST00000518490 515 ntBASIC5.28□□□□□ -1.56
SSR1P43307 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.28□□□□□ -1.56
SSR1P43307 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.28□□□□□ -1.56
SSR1P43307 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.28□□□□□ -1.56
SSR1P43307 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.28□□□□□ -1.56
SSR1P43307 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.28□□□□□ -1.56
SSR1P43307 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSR1P43307 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.28□□□□□ -1.56
SSR1P43307 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.28□□□□□ -1.56
SSR1P43307 AC095055.1-201ENST00000603472 1113 ntBASIC5.28□□□□□ -1.56
SSR1P43307 AL512329.2-201ENST00000607350 548 ntBASIC5.28□□□□□ -1.56
SSR1P43307 AP005432.2-201ENST00000608162 586 ntBASIC5.28□□□□□ -1.56
SSR1P43307 SNX18P1Y-201ENST00000616231 511 ntBASIC5.28□□□□□ -1.56
SSR1P43307 AC004825.2-201ENST00000616634 455 ntBASIC5.28□□□□□ -1.56
SSR1P43307 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.28□□□□□ -1.56
SSR1P43307 AC099494.2-201ENST00000623371 978 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms