Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCLP35914 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCLP35914 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCLP35914 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGCLP35914 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HMGCLP35914 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
HMGCLP35914 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCLP35914 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGCLP35914 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCLP35914 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGCLP35914 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCLP35914 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HMGCLP35914 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HMGCLP35914 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGCLP35914 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HMGCLP35914 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HMGCLP35914 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCLP35914 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
HMGCLP35914 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCLP35914 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HMGCLP35914 DDX18P5-201ENST00000534547 1306 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGCLP35914 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGCLP35914 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGCLP35914 RN7SKP125-201ENST00000410481 302 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 AC013268.2-201ENST00000420753 337 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 HMGB1P32-201ENST00000425971 565 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 BRWD1P3-201ENST00000428816 390 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 AL451139.1-201ENST00000434718 346 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGCLP35914 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGCLP35914 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGCLP35914 RPL31P44-201ENST00000447680 377 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 RBMY2TP-201ENST00000451162 947 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 AC234781.3-201ENST00000452540 973 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 AL356390.1-201ENST00000455684 397 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGCLP35914 AC008410.1-201ENST00000483777 339 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 AC093270.2-201ENST00000486157 792 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCLP35914 NDUFA5P12-201ENST00000503796 343 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 RNA5SP249-201ENST00000516127 99 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 RNU6-362P-201ENST00000516736 90 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 RNU6-709P-201ENST00000517257 104 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.84□□□□□ -1.63
HMGCLP35914 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.84□□□□□ -1.63
HMGCLP35914 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGCLP35914 BUD31P1-201ENST00000521828 359 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.84□□□□□ -1.63
HMGCLP35914 MORF4L1P3-201ENST00000525966 950 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 AP001922.4-201ENST00000526967 290 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.84□□□□□ -1.63
HMGCLP35914 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGCLP35914 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.84□□□□□ -1.63
HMGCLP35914 AC051619.2-201ENST00000559063 397 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGCLP35914 MIR4675-201ENST00000577898 77 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGCLP35914 AL133406.3-201ENST00000606817 541 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 AC096586.2-201ENST00000610260 441 ntBASIC4.84□□□□□ -1.63
HMGCLP35914 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCLP35914 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGCLP35914 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGCLP35914 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
HMGCLP35914 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMGCLP35914 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
HMGCLP35914 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.84□□□□□ -1.64
HMGCLP35914 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.84□□□□□ -1.64
HMGCLP35914 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 AL034370.1-201ENST00000397254 1590 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 SAMMSON-226ENST00000642089 1582 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 TLK1P1-201ENST00000456760 2440 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 RNU6-729P-201ENST00000384399 107 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HMGCLP35914 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 MIR1271-201ENST00000408537 86 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 MTND4LP21-201ENST00000415303 295 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 RPS26P13-201ENST00000419030 330 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 VN1R37P-201ENST00000419096 748 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGCLP35914 LINC00993-201ENST00000420453 540 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 AC007394.1-201ENST00000421941 531 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 RPS17P8-201ENST00000434525 335 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 RPL7P61-201ENST00000451721 751 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGCLP35914 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGCLP35914 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGCLP35914 RNU6-943P-201ENST00000516960 98 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.83□□□□□ -1.64
HMGCLP35914 AC025423.2-201ENST00000537570 439 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms