Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.77□□□□□ -1.65
RORAP35398 TCEA1P1-201ENST00000449716 880 ntBASIC4.77□□□□□ -1.65
RORAP35398 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 RN7SL809P-201ENST00000482040 297 ntBASIC4.77□□□□□ -1.65
RORAP35398 AC007686.1-201ENST00000488511 463 ntBASIC4.77□□□□□ -1.65
RORAP35398 MRPS33P2-201ENST00000507850 322 ntBASIC4.77□□□□□ -1.65
RORAP35398 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.77□□□□□ -1.65
RORAP35398 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.77□□□□□ -1.65
RORAP35398 AC025423.2-201ENST00000537570 439 ntBASIC4.77□□□□□ -1.65
RORAP35398 AL512310.9-201ENST00000553311 948 ntBASIC4.77□□□□□ -1.65
RORAP35398 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.77□□□□□ -1.65
RORAP35398 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.77□□□□□ -1.65
RORAP35398 BGLT3-201ENST00000564523 994 ntBASIC4.77□□□□□ -1.65
RORAP35398 MTND2P13-201ENST00000577438 1039 ntBASIC4.77□□□□□ -1.65
RORAP35398 MIR4737-201ENST00000583979 81 ntBASIC4.77□□□□□ -1.65
RORAP35398 PRPF19P1-201ENST00000584766 898 ntBASIC4.77□□□□□ -1.65
RORAP35398 AL031320.1-201ENST00000604177 357 ntBASIC4.77□□□□□ -1.65
RORAP35398 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.77□□□□□ -1.65
RORAP35398 MIR6820-201ENST00000611508 62 ntBASIC4.77□□□□□ -1.65
RORAP35398 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.77□□□□□ -1.65
RORAP35398 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
RORAP35398 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.77□□□□□ -1.65
RORAP35398 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RORAP35398 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.77□□□□□ -1.65
RORAP35398 AC132825.1-201ENST00000463573 2247 ntBASIC4.77□□□□□ -1.65
RORAP35398 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RORAP35398 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.77□□□□□ -1.65
RORAP35398 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RORAP35398 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
RORAP35398 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.77□□□□□ -1.65
RORAP35398 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RORAP35398 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RORAP35398 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RORAP35398 AC233968.1-201ENST00000611212 1300 ntBASIC4.76□□□□□ -1.65
RORAP35398 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RORAP35398 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.76□□□□□ -1.65
RORAP35398 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RORAP35398 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RORAP35398 RNU6-1331P-201ENST00000363658 106 ntBASIC4.76□□□□□ -1.65
RORAP35398 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RORAP35398 SNORA77-201ENST00000408716 125 ntBASIC4.76□□□□□ -1.65
RORAP35398 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RORAP35398 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.76□□□□□ -1.65
RORAP35398 COX6CP13-201ENST00000428703 226 ntBASIC4.76□□□□□ -1.65
RORAP35398 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.76□□□□□ -1.65
RORAP35398 AC008072.1-201ENST00000434254 824 ntBASIC4.76□□□□□ -1.65
RORAP35398 RPS29P9-201ENST00000440360 171 ntBASIC4.76□□□□□ -1.65
RORAP35398 AC112498.1-201ENST00000444401 332 ntBASIC4.76□□□□□ -1.65
RORAP35398 AC004980.3-201ENST00000447046 365 ntBASIC4.76□□□□□ -1.65
RORAP35398 RN7SL319P-201ENST00000480656 221 ntBASIC4.76□□□□□ -1.65
RORAP35398 AC090142.2-201ENST00000483263 416 ntBASIC4.76□□□□□ -1.65
RORAP35398 AC005412.2-201ENST00000492004 341 ntBASIC4.76□□□□□ -1.65
RORAP35398 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.76□□□□□ -1.65
RORAP35398 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.76□□□□□ -1.65
RORAP35398 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.76□□□□□ -1.65
RORAP35398 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RORAP35398 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.76□□□□□ -1.65
RORAP35398 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.76□□□□□ -1.65
RORAP35398 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.76□□□□□ -1.65
RORAP35398 AC115989.2-201ENST00000578640 563 ntBASIC4.76□□□□□ -1.65
RORAP35398 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.76□□□□□ -1.65
RORAP35398 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RORAP35398 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.76□□□□□ -1.65
RORAP35398 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.76□□□□□ -1.65
RORAP35398 AL450326.2-201ENST00000421913 1962 ntBASIC4.76□□□□□ -1.65
RORAP35398 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.76□□□□□ -1.65
RORAP35398 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.76□□□□□ -1.65
RORAP35398 AC000123.3-201ENST00000624029 4975 ntBASIC4.76□□□□□ -1.65
RORAP35398 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RORAP35398 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.76□□□□□ -1.65
RORAP35398 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.76□□□□□ -1.65
RORAP35398 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.76□□□□□ -1.65
RORAP35398 AC107027.3-201ENST00000565095 3473 ntBASIC4.76□□□□□ -1.65
RORAP35398 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RORAP35398 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RORAP35398 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RORAP35398 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RORAP35398 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RORAP35398 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.75□□□□□ -1.65
RORAP35398 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RORAP35398 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RORAP35398 AL731532.2-201ENST00000623542 1953 ntBASIC4.75□□□□□ -1.65
RORAP35398 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RORAP35398 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RORAP35398 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RORAP35398 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.75□□□□□ -1.65
RORAP35398 RNU6-178P-201ENST00000384631 104 ntBASIC4.75□□□□□ -1.65
RORAP35398 ATP5HP3-201ENST00000396994 486 ntBASIC4.75□□□□□ -1.65
RORAP35398 RPL21P67-201ENST00000402896 478 ntBASIC4.75□□□□□ -1.65
RORAP35398 RPL5P19-201ENST00000404228 893 ntBASIC4.75□□□□□ -1.65
RORAP35398 AL035079.1-201ENST00000405210 287 ntBASIC4.75□□□□□ -1.65
RORAP35398 NCSTNP1-201ENST00000406229 144 ntBASIC4.75□□□□□ -1.65
RORAP35398 MIR1271-201ENST00000408537 86 ntBASIC4.75□□□□□ -1.65
RORAP35398 Y_RNA.625-201ENST00000411256 107 ntBASIC4.75□□□□□ -1.65
RORAP35398 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.75□□□□□ -1.65
RORAP35398 TRGV7-201ENST00000427089 353 ntBASIC4.75□□□□□ -1.65
RORAP35398 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RORAP35398 AL121578.1-201ENST00000428051 892 ntBASIC4.75□□□□□ -1.65
RORAP35398 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.75□□□□□ -1.65
RORAP35398 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms