Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHMT2P34897 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHMT2P34897 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
SHMT2P34897 AC008758.3-201ENST00000507003 1829 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHMT2P34897 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHMT2P34897 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHMT2P34897 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHMT2P34897 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHMT2P34897 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHMT2P34897 GAPDHP15-201ENST00000398586 975 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.74□□□□□ -1.65
SHMT2P34897 AC114755.2-201ENST00000413520 361 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.74□□□□□ -1.65
SHMT2P34897 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.74□□□□□ -1.65
SHMT2P34897 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.74□□□□□ -1.65
SHMT2P34897 RBMY2TP-201ENST00000451162 947 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 AL445433.1-201ENST00000457507 257 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.74□□□□□ -1.65
SHMT2P34897 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.74□□□□□ -1.65
SHMT2P34897 AC090686.1-201ENST00000481577 749 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 AC083982.1-201ENST00000485679 344 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.74□□□□□ -1.65
SHMT2P34897 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.74□□□□□ -1.65
SHMT2P34897 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.74□□□□□ -1.65
SHMT2P34897 RPL23AP53-201ENST00000521854 457 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 EIF4A2P5-201ENST00000529914 499 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 AC025423.2-201ENST00000537570 439 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.74□□□□□ -1.65
SHMT2P34897 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.74□□□□□ -1.65
SHMT2P34897 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.74□□□□□ -1.65
SHMT2P34897 AL358913.1-201ENST00000554342 121 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 AP001542.1-201ENST00000591314 200 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 NF1P10-201ENST00000613227 742 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.74□□□□□ -1.65
SHMT2P34897 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
SHMT2P34897 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.74□□□□□ -1.65
SHMT2P34897 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.74□□□□□ -1.65
SHMT2P34897 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHMT2P34897 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
SHMT2P34897 SDAD1P1-202ENST00000524156 2051 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 SAMMSON-226ENST00000642089 1582 ntBASIC4.74□□□□□ -1.65
SHMT2P34897 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHMT2P34897 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SHMT2P34897 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 SETP15-201ENST00000412724 337 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 AC234781.4-201ENST00000419384 244 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.73□□□□□ -1.65
SHMT2P34897 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 AC000111.2-201ENST00000448200 210 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 MTND4LP12-201ENST00000448237 295 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 AC234781.3-201ENST00000452540 973 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 AC091685.2-201ENST00000454924 864 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.73□□□□□ -1.65
SHMT2P34897 RPL23AP56-201ENST00000460778 453 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
SHMT2P34897 NPM1P29-201ENST00000483112 803 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 AP000926.3-201ENST00000497201 299 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 ENPP7P9-201ENST00000514456 627 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.73□□□□□ -1.65
SHMT2P34897 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.73□□□□□ -1.65
SHMT2P34897 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.73□□□□□ -1.65
SHMT2P34897 AC084033.1-201ENST00000550830 633 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 SETP1-201ENST00000556014 845 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 SNORA74C-1-201ENST00000580726 201 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 MIR3667-201ENST00000581025 74 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.73□□□□□ -1.65
SHMT2P34897 VN1R81P-201ENST00000602085 372 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 AC008536.1-201ENST00000602872 669 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 RNF138P2-201ENST00000603490 592 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 AL031320.1-201ENST00000604177 357 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 SNORA35B-201ENST00000607417 129 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 AC010424.2-201ENST00000607594 443 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 Mico1.1-201ENST00000611698 204 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 AP001784.1-201ENST00000624107 428 ntBASIC4.73□□□□□ -1.65
SHMT2P34897 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.73□□□□□ -1.65
SHMT2P34897 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.73□□□□□ -1.65
SHMT2P34897 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHMT2P34897 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SHMT2P34897 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHMT2P34897 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SHMT2P34897 RN7SKP103-201ENST00000363848 320 ntBASIC4.72□□□□□ -1.65
SHMT2P34897 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHMT2P34897 AL357515.1-201ENST00000402967 542 ntBASIC4.72□□□□□ -1.65
SHMT2P34897 RNA5SP345-201ENST00000410646 108 ntBASIC4.72□□□□□ -1.65
SHMT2P34897 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHMT2P34897 AL139128.1-201ENST00000413921 941 ntBASIC4.72□□□□□ -1.65
SHMT2P34897 TMBIM7P-201ENST00000418074 855 ntBASIC4.72□□□□□ -1.65
SHMT2P34897 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms