Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 OR52A4P-201ENST00000472867 958 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 KATNBL1P4-201ENST00000503545 918 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 OR10D4P-201ENST00000525892 951 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.07□□□□□ -1.6
HOXA9P31269 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA9P31269 AC133555.2-201ENST00000550213 292 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA9P31269 MIR5699-201ENST00000578903 90 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 AP005119.2-201ENST00000579735 1105 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA9P31269 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXA9P31269 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXA9P31269 AC093765.1-201ENST00000603758 881 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA9P31269 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA9P31269 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HOXA9P31269 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA9P31269 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA9P31269 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA9P31269 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.06□□□□□ -1.6
HOXA9P31269 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA9P31269 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA9P31269 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXA9P31269 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA9P31269 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXA9P31269 CENPIP1-201ENST00000425713 902 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 RPL7AP61-201ENST00000443410 636 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 AC012512.1-201ENST00000446594 718 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXA9P31269 AC068587.1-201ENST00000483613 781 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 RNU2-30P-201ENST00000516209 141 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXA9P31269 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXA9P31269 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXA9P31269 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXA9P31269 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXA9P31269 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXA9P31269 PRPF19P1-201ENST00000584766 898 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXA9P31269 AL356218.2-201ENST00000605264 187 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 AC006338.2-201ENST00000616864 791 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXA9P31269 MIR6758-201ENST00000620653 63 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 AC016717.3-201ENST00000624730 554 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 TMEM30CP-203ENST00000637814 1035 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXA9P31269 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXA9P31269 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA9P31269 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
HOXA9P31269 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA9P31269 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXA9P31269 AL592148.3-201ENST00000608771 2646 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
HOXA9P31269 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXA9P31269 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
HOXA9P31269 THAP12P5-201ENST00000405864 2275 ntBASIC5.06□□□□□ -1.6
HOXA9P31269 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HOXA9P31269 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HOXA9P31269 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXA9P31269 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXA9P31269 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.05□□□□□ -1.6
HOXA9P31269 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HOXA9P31269 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXA9P31269 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HOXA9P31269 RPL32P3-201ENST00000359025 275 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 AC007068.1-201ENST00000396690 844 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 RPL12P9-201ENST00000412942 488 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 P2RY10P2-201ENST00000416730 913 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 ATG4AP1-201ENST00000416893 538 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.05□□□□□ -1.6
HOXA9P31269 AL645608.4-201ENST00000423619 154 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.05□□□□□ -1.6
HOXA9P31269 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.05□□□□□ -1.6
HOXA9P31269 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.05□□□□□ -1.6
HOXA9P31269 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.05□□□□□ -1.6
HOXA9P31269 AC104849.1-201ENST00000462623 405 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 AC026979.1-201ENST00000492525 396 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 MYL12BP2-201ENST00000503948 512 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 RFPL4AP5-201ENST00000514977 504 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXA9P31269 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.05□□□□□ -1.6
HOXA9P31269 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXA9P31269 AL049839.1-201ENST00000556151 657 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.05□□□□□ -1.6
HOXA9P31269 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXA9P31269 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.05□□□□□ -1.6
HOXA9P31269 AL022401.1-201ENST00000619498 108 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HOXA9P31269 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.05□□□□□ -1.6
HOXA9P31269 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HOXA9P31269 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HOXA9P31269 OR56B2P-202ENST00000641377 2453 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.05□□□□□ -1.6
HOXA9P31269 AC125257.1-201ENST00000560400 2930 ntBASIC5.05□□□□□ -1.6
HOXA9P31269 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms