Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.15□□□□□ -1.43
SMARCA1P28370 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
SMARCA1P28370 RARSP1-201ENST00000542842 1418 ntBASIC6.15□□□□□ -1.43
SMARCA1P28370 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.15□□□□□ -1.43
SMARCA1P28370 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SMARCA1P28370 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SMARCA1P28370 AL590763.1-201ENST00000398297 1545 ntBASIC6.15□□□□□ -1.43
SMARCA1P28370 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC007342.7-201ENST00000624610 2337 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMARCA1P28370 RN7SKP153-201ENST00000365026 316 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.14□□□□□ -1.43
SMARCA1P28370 GNG5P5-201ENST00000420444 220 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.14□□□□□ -1.43
SMARCA1P28370 DEFB130D-201ENST00000426866 237 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 VTI1BP4-201ENST00000427516 527 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 HSPD1P12-201ENST00000429127 1069 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.14□□□□□ -1.43
SMARCA1P28370 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMARCA1P28370 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.14□□□□□ -1.43
SMARCA1P28370 EIF2S2P2-201ENST00000447161 982 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 AL157827.1-201ENST00000447622 132 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.14□□□□□ -1.43
SMARCA1P28370 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC020898.1-201ENST00000474167 787 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 AC079841.1-201ENST00000481228 950 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.14□□□□□ -1.43
SMARCA1P28370 RN7SL629P-201ENST00000489622 285 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC093534.1-201ENST00000504977 132 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.14□□□□□ -1.43
SMARCA1P28370 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC090888.2-201ENST00000559765 1144 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.14□□□□□ -1.43
SMARCA1P28370 RMST_10.1-201ENST00000616309 154 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.14□□□□□ -1.43
SMARCA1P28370 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SMARCA1P28370 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMARCA1P28370 AC092451.3-201ENST00000625067 1343 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SMARCA1P28370 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SMARCA1P28370 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMARCA1P28370 MTCO1P15-201ENST00000529569 1526 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 RLIMP2-201ENST00000427891 1563 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 UGT2B26P-201ENST00000508672 1613 ntBASIC6.14□□□□□ -1.43
SMARCA1P28370 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.14□□□□□ -1.43
SMARCA1P28370 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMARCA1P28370 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
SMARCA1P28370 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SMARCA1P28370 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMARCA1P28370 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.13□□□□□ -1.43
SMARCA1P28370 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SMARCA1P28370 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.13□□□□□ -1.43
SMARCA1P28370 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMARCA1P28370 RN7SKP74-201ENST00000362849 309 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.13□□□□□ -1.43
SMARCA1P28370 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
SMARCA1P28370 HMGB1P10-201ENST00000395823 563 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AP002784.2-201ENST00000397300 549 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 ZNF602P-201ENST00000405929 924 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.13□□□□□ -1.43
SMARCA1P28370 RPL35AP24-201ENST00000413846 330 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AL592310.1-201ENST00000414330 671 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AC008173.1-201ENST00000418901 264 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 RPL23AP4-201ENST00000427757 463 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.13□□□□□ -1.43
SMARCA1P28370 MTND2P5-201ENST00000432656 1006 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AC245047.2-201ENST00000441060 530 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 MTCO1P53-201ENST00000441633 699 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 MED28P3-201ENST00000444288 531 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 RPL6P5-201ENST00000445678 828 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.13□□□□□ -1.43
SMARCA1P28370 AC104634.1-201ENST00000452720 462 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AC026348.1-201ENST00000462549 1053 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AC074386.1-201ENST00000476560 767 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 RN7SL727P-201ENST00000482164 296 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 RPS4XP1-201ENST00000482189 787 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.13□□□□□ -1.43
SMARCA1P28370 RPS12P31-201ENST00000491419 398 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 RPS4XP14-201ENST00000493072 781 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.13□□□□□ -1.43
SMARCA1P28370 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.13□□□□□ -1.43
SMARCA1P28370 HPRT1P1-201ENST00000509498 657 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.13□□□□□ -1.43
SMARCA1P28370 IGHV3-63-201ENST00000518422 341 ntBASIC6.13□□□□□ -1.43
SMARCA1P28370 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.13□□□□□ -1.43
SMARCA1P28370 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.13□□□□□ -1.43
SMARCA1P28370 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMARCA1P28370 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMARCA1P28370 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms