Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 IGHV5-78-201ENST00000450948 295 ntBASIC5.95□□□□□ -1.46
POLR2AP24928 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.95□□□□□ -1.46
POLR2AP24928 AC069306.1-201ENST00000507006 843 ntBASIC5.95□□□□□ -1.46
POLR2AP24928 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.95□□□□□ -1.46
POLR2AP24928 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.95□□□□□ -1.46
POLR2AP24928 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
POLR2AP24928 MTND3P13-201ENST00000574391 343 ntBASIC5.95□□□□□ -1.46
POLR2AP24928 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.95□□□□□ -1.46
POLR2AP24928 AL020997.2-201ENST00000602607 184 ntBASIC5.95□□□□□ -1.46
POLR2AP24928 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.95□□□□□ -1.46
POLR2AP24928 AC026741.1-201ENST00000605892 482 ntBASIC5.95□□□□□ -1.46
POLR2AP24928 AC096586.1-201ENST00000610267 561 ntBASIC5.95□□□□□ -1.46
POLR2AP24928 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
POLR2AP24928 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.95□□□□□ -1.46
POLR2AP24928 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.95□□□□□ -1.46
POLR2AP24928 AL117339.4-201ENST00000608335 7063 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
POLR2AP24928 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.94□□□□□ -1.46
POLR2AP24928 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
POLR2AP24928 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.94□□□□□ -1.46
POLR2AP24928 MTND4P5-201ENST00000435821 1374 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
POLR2AP24928 AL592148.3-201ENST00000608771 2646 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
POLR2AP24928 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
POLR2AP24928 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
POLR2AP24928 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.94□□□□□ -1.46
POLR2AP24928 OR9G4-201ENST00000302957 984 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
POLR2AP24928 SNORD116-1-201ENST00000384335 95 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 AL607077.1-201ENST00000401718 499 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 MIR1193-201ENST00000408109 78 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.94□□□□□ -1.46
POLR2AP24928 AC012519.1-201ENST00000424588 610 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.94□□□□□ -1.46
POLR2AP24928 NPM1P25-201ENST00000429734 854 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
POLR2AP24928 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.94□□□□□ -1.46
POLR2AP24928 AC109327.1-201ENST00000471666 403 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 NIP7P2-201ENST00000485801 544 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.94□□□□□ -1.46
POLR2AP24928 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.94□□□□□ -1.46
POLR2AP24928 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.94□□□□□ -1.46
POLR2AP24928 AC074029.2-201ENST00000551045 634 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.94□□□□□ -1.46
POLR2AP24928 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.94□□□□□ -1.46
POLR2AP24928 TVP23CP2-201ENST00000571473 623 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 SS18L2P2-201ENST00000583960 235 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.94□□□□□ -1.46
POLR2AP24928 PCNAP1-202ENST00000595299 752 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 AC067959.1-201ENST00000604334 379 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 LINC00216-201ENST00000623548 1126 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 AL078595.3-201ENST00000623815 1166 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 AP000843.1-201ENST00000624880 701 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.94□□□□□ -1.46
POLR2AP24928 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.94□□□□□ -1.46
POLR2AP24928 AC135068.12-201ENST00000637370 931 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
POLR2AP24928 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
POLR2AP24928 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
POLR2AP24928 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.94□□□□□ -1.46
POLR2AP24928 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.94□□□□□ -1.46
POLR2AP24928 AC100871.1-201ENST00000507871 1456 ntBASIC5.94□□□□□ -1.46
POLR2AP24928 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
POLR2AP24928 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
POLR2AP24928 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
POLR2AP24928 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
POLR2AP24928 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
POLR2AP24928 SNORD113.2-201ENST00000364166 89 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
POLR2AP24928 RN7SKP114-201ENST00000410327 279 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 RPL23AP1-201ENST00000428990 471 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AL691517.1-201ENST00000440833 1235 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 RPL7AP61-201ENST00000443410 636 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.93□□□□□ -1.46
POLR2AP24928 AC091435.1-201ENST00000505442 584 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.93□□□□□ -1.46
POLR2AP24928 AP001207.2-201ENST00000519490 539 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 AL110118.1-201ENST00000553543 400 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 MTCO2P2-201ENST00000591258 225 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
POLR2AP24928 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
POLR2AP24928 AC231759.1-201ENST00000616455 597 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 MIR6830-201ENST00000636015 70 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
POLR2AP24928 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
POLR2AP24928 CCT8P1-201ENST00000413611 1657 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
POLR2AP24928 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
POLR2AP24928 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
POLR2AP24928 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC5.93□□□□□ -1.46
POLR2AP24928 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms