Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NPM1P47-201ENST00000560843 856 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC018552.3-201ENST00000567416 561 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC019322.1-201ENST00000571869 389 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC022884.3-201ENST00000579571 248 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 AC007382.1-201ENST00000624376 2618 ntBASIC5.13□□□□□ -1.59
HLA-DPA1P20036 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DPA1P20036 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC017079.1-201ENST00000333650 415 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 MIR105-2-201ENST00000385083 81 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 RN7SKP16-201ENST00000410180 299 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 DPPA2P3-201ENST00000411853 655 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 BMS1P13-201ENST00000417301 885 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC092013.1-201ENST00000438795 332 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 EEF1B2P5-201ENST00000444820 548 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 RSL24D1P2-201ENST00000445584 366 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AL354714.3-201ENST00000447284 493 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC010627.1-201ENST00000503819 1294 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC051619.2-201ENST00000559063 397 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC067805.1-201ENST00000559344 470 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 PSMA6P4-201ENST00000603247 718 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 TAS2R6P-201ENST00000605022 826 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AL133406.3-201ENST00000606817 541 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 BX005214.3-202ENST00000619809 325 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AC074276.2-201ENST00000619891 348 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AP000648.2-201ENST00000624182 404 ntBASIC5.12□□□□□ -1.59
HLA-DPA1P20036 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPA1P20036 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC114947.2-201ENST00000565748 2125 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC011155.1-201ENST00000316512 456 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 RPL23P2-201ENST00000320371 421 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 SPTLC1P2-201ENST00000407089 121 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 RN7SKP273-201ENST00000411392 314 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 OR6C64P-201ENST00000419708 825 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 DPY19L1P2-201ENST00000426647 915 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 RPL7AP61-201ENST00000443410 636 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC023512.1-201ENST00000444513 499 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC092647.2-201ENST00000452998 253 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC004815.1-201ENST00000484185 331 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC008953.1-201ENST00000497334 318 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC108120.2-201ENST00000512973 294 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms