Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC139713.2-215ENST00000641428 5037 ntBASIC4.15□□□□□ -1.74
CTLA4P16410 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTLA4P16410 AC112255.1-201ENST00000624070 2493 ntBASIC4.15□□□□□ -1.74
CTLA4P16410 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTLA4P16410 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CTLA4P16410 OR56B2P-201ENST00000317102 954 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTLA4P16410 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CTLA4P16410 RSU1P3-201ENST00000412878 835 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 AL591848.1-201ENST00000413092 322 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC004074.1-201ENST00000421810 1063 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.15□□□□□ -1.75
CTLA4P16410 NPM1P48-201ENST00000436002 853 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 OR1H1P-201ENST00000448731 937 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 RBMY2TP-201ENST00000451162 947 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 AC090142.1-201ENST00000465776 462 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.15□□□□□ -1.75
CTLA4P16410 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC004453.1-201ENST00000487895 408 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 BTG4P1-201ENST00000510421 183 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.15□□□□□ -1.75
CTLA4P16410 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.15□□□□□ -1.75
CTLA4P16410 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 AP001880.2-201ENST00000538233 448 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.15□□□□□ -1.75
CTLA4P16410 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC009117.1-201ENST00000563948 554 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 BGLT3-201ENST00000564523 994 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.15□□□□□ -1.75
CTLA4P16410 AC209154.1-201ENST00000582156 337 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.15□□□□□ -1.75
CTLA4P16410 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 AC018445.2-201ENST00000622987 260 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 AC005086.4-201ENST00000623065 213 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTLA4P16410 CR382285.2-201ENST00000624662 1495 ntBASIC4.15□□□□□ -1.75
CTLA4P16410 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.15□□□□□ -1.75
CTLA4P16410 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.15□□□□□ -1.75
CTLA4P16410 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.15□□□□□ -1.75
CTLA4P16410 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTLA4P16410 AL355852.1-201ENST00000454081 1771 ntBASIC4.14□□□□□ -1.75
CTLA4P16410 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTLA4P16410 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTLA4P16410 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.14□□□□□ -1.75
CTLA4P16410 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.14□□□□□ -1.75
CTLA4P16410 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.14□□□□□ -1.75
CTLA4P16410 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.14□□□□□ -1.75
CTLA4P16410 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 SNORA74A-201ENST00000364089 198 ntBASIC4.14□□□□□ -1.75
CTLA4P16410 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 AL589647.1-201ENST00000402485 466 ntBASIC4.14□□□□□ -1.75
CTLA4P16410 RNA5SP296-201ENST00000410523 111 ntBASIC4.14□□□□□ -1.75
CTLA4P16410 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.14□□□□□ -1.75
CTLA4P16410 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.14□□□□□ -1.75
CTLA4P16410 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 AC097523.2-201ENST00000435551 652 ntBASIC4.14□□□□□ -1.75
CTLA4P16410 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.14□□□□□ -1.75
CTLA4P16410 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.14□□□□□ -1.75
CTLA4P16410 RPL7P16-201ENST00000479738 738 ntBASIC4.14□□□□□ -1.75
CTLA4P16410 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.14□□□□□ -1.75
CTLA4P16410 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.14□□□□□ -1.75
CTLA4P16410 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.14□□□□□ -1.75
CTLA4P16410 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.14□□□□□ -1.75
CTLA4P16410 AC105129.1-201ENST00000560250 297 ntBASIC4.14□□□□□ -1.75
CTLA4P16410 AP002884.5-201ENST00000595053 1132 ntBASIC4.14□□□□□ -1.75
CTLA4P16410 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.14□□□□□ -1.75
CTLA4P16410 AC068870.2-201ENST00000620635 389 ntBASIC4.14□□□□□ -1.75
CTLA4P16410 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.14□□□□□ -1.75
CTLA4P16410 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CTLA4P16410 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CTLA4P16410 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.14□□□□□ -1.75
CTLA4P16410 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTLA4P16410 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTLA4P16410 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
CTLA4P16410 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
CTLA4P16410 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
CTLA4P16410 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.13□□□□□ -1.75
CTLA4P16410 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms