Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC104307.1-201ENST00000616142 196 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 AC003001.2-201ENST00000616294 831 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 AL356274.1-201ENST00000617064 410 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 BX005214.3-202ENST00000619809 325 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 AP002967.1-201ENST00000624203 539 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 AC132825.1-201ENST00000463573 2247 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 HSPA8P17-201ENST00000427029 1382 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PDGFRAP16234 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFRAP16234 THAP12P4-201ENST00000528321 2266 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFRAP16234 NXF4-202ENST00000416098 1465 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFRAP16234 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFRAP16234 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
PDGFRAP16234 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFRAP16234 RNU4-39P-201ENST00000362455 127 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 RNA5SP455-201ENST00000365190 119 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PDGFRAP16234 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFRAP16234 RNU6-883P-201ENST00000384597 107 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PDGFRAP16234 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFRAP16234 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFRAP16234 AC006065.1-201ENST00000422539 802 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 PSMD10P3-201ENST00000437000 448 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 AL450023.3-201ENST00000440592 271 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 TCEA1P3-201ENST00000443005 880 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 AL354714.3-201ENST00000447284 493 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 IGHV5-78-201ENST00000450948 295 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFRAP16234 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.27□□□□□ -1.57
PDGFRAP16234 HMGB1P4-201ENST00000455362 567 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 AC037198.2-201ENST00000478845 733 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 RN7SL244P-201ENST00000493405 297 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFRAP16234 RNU6-889P-201ENST00000517189 103 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 IGHV3-63-201ENST00000518422 341 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 AC105031.1-201ENST00000518550 476 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 AC012339.2-201ENST00000523996 453 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFRAP16234 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.27□□□□□ -1.57
PDGFRAP16234 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFRAP16234 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFRAP16234 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.27□□□□□ -1.57
PDGFRAP16234 AL133247.2-201ENST00000603236 482 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 AL354696.1-201ENST00000614652 497 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 AL162233.1-201ENST00000620014 944 ntBASIC5.27□□□□□ -1.57
PDGFRAP16234 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDGFRAP16234 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.27□□□□□ -1.57
PDGFRAP16234 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDGFRAP16234 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFRAP16234 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.26□□□□□ -1.57
PDGFRAP16234 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFRAP16234 AC011447.7-201ENST00000624228 1590 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PDGFRAP16234 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
PDGFRAP16234 AC017079.1-201ENST00000333650 415 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 SNORA70.10-201ENST00000384515 134 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 SNORA66-201ENST00000384792 133 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 SNORA68.2-201ENST00000391263 128 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 ATP5HP3-201ENST00000396994 486 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AL645733.1-201ENST00000402250 217 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AL589647.1-201ENST00000402485 466 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.26□□□□□ -1.57
PDGFRAP16234 AC007738.1-201ENST00000413892 348 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 RPS26P13-201ENST00000419030 330 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 RBMY2QP-201ENST00000429799 1147 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 RPL12P3-201ENST00000440080 396 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 RPS29P9-201ENST00000440360 171 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 RPL34P20-201ENST00000442771 351 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFRAP16234 MRPL35P2-201ENST00000448009 511 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 TCEA1P1-201ENST00000449716 880 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AC021087.2-201ENST00000504656 1203 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AC021146.7-201ENST00000509604 775 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 COX6B1P5-201ENST00000509843 249 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 BTG4P1-201ENST00000510421 183 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFRAP16234 MTCYBP19-201ENST00000517463 1124 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 OR7E128P-201ENST00000532736 1024 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFRAP16234 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.26□□□□□ -1.57
PDGFRAP16234 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFRAP16234 NMNAT1P1-201ENST00000554095 876 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 SETP1-201ENST00000556014 845 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AC084373.1-201ENST00000603311 235 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms