Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.96□□□□□ -1.14
TOP2AP11388 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.96□□□□□ -1.14
TOP2AP11388 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TOP2AP11388 SAMM50P1-201ENST00000455403 1399 ntBASIC7.95□□□□□ -1.14
TOP2AP11388 CASC19-255ENST00000641733 1385 ntBASIC7.95□□□□□ -1.14
TOP2AP11388 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TOP2AP11388 AL445487.1-201ENST00000415694 1580 ntBASIC7.95□□□□□ -1.14
TOP2AP11388 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.95□□□□□ -1.14
TOP2AP11388 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
TOP2AP11388 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TOP2AP11388 RNU1-64P-201ENST00000365443 163 ntBASIC7.95□□□□□ -1.14
TOP2AP11388 RPL36AP36-201ENST00000418616 301 ntBASIC7.95□□□□□ -1.14
TOP2AP11388 EIF4HP2-201ENST00000424380 563 ntBASIC7.95□□□□□ -1.14
TOP2AP11388 AC090506.2-201ENST00000624521 419 ntBASIC7.95□□□□□ -1.14
TOP2AP11388 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TOP2AP11388 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC7.95□□□□□ -1.14
TOP2AP11388 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
TOP2AP11388 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TOP2AP11388 ADAM5-202ENST00000399789 1942 ntBASIC7.95□□□□□ -1.14
TOP2AP11388 AC005261.4-201ENST00000600047 1385 ntBASIC7.95□□□□□ -1.14
TOP2AP11388 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
TOP2AP11388 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.95□□□□□ -1.14
TOP2AP11388 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TOP2AP11388 RNU6ATAC34P-201ENST00000408879 121 ntBASIC7.94□□□□□ -1.14
TOP2AP11388 AC104333.2-201ENST00000422630 192 ntBASIC7.94□□□□□ -1.14
TOP2AP11388 RPL21P43-201ENST00000425440 472 ntBASIC7.94□□□□□ -1.14
TOP2AP11388 TRGV7-201ENST00000427089 353 ntBASIC7.94□□□□□ -1.14
TOP2AP11388 MIR2116-201ENST00000517221 80 ntBASIC7.94□□□□□ -1.14
TOP2AP11388 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
TOP2AP11388 AC091979.2-201ENST00000607514 214 ntBASIC7.94□□□□□ -1.14
TOP2AP11388 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TOP2AP11388 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC7.94□□□□□ -1.14
TOP2AP11388 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC7.94□□□□□ -1.14
TOP2AP11388 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TOP2AP11388 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TOP2AP11388 DDX18P5-201ENST00000534547 1306 ntBASIC7.94□□□□□ -1.14
TOP2AP11388 AC018628.1-201ENST00000624147 3819 ntBASIC7.94□□□□□ -1.14
TOP2AP11388 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TOP2AP11388 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.94□□□□□ -1.14
TOP2AP11388 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.94□□□□□ -1.14
TOP2AP11388 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TOP2AP11388 SPRR2C-201ENST00000290702 219 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.93□□□□□ -1.14
TOP2AP11388 AC008958.1-201ENST00000511047 682 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC7.93□□□□□ -1.14
TOP2AP11388 AC006130.2-201ENST00000586202 326 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 AC245389.1-201ENST00000605141 529 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 uc_338.13-201ENST00000618243 179 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TOP2AP11388 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TOP2AP11388 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
TOP2AP11388 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.93□□□□□ -1.14
TOP2AP11388 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
TOP2AP11388 SNX18P3-202ENST00000565670 1750 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TOP2AP11388 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TOP2AP11388 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
TOP2AP11388 AC025750.1-201ENST00000399891 379 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 Z74021.1-201ENST00000423610 407 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 RPL7P33-201ENST00000444159 742 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 RPS27AP13-201ENST00000498403 237 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC7.93□□□□□ -1.14
TOP2AP11388 AC097486.1-201ENST00000515331 210 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.93□□□□□ -1.14
TOP2AP11388 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TOP2AP11388 MED28P5-201ENST00000528254 438 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.93□□□□□ -1.14
TOP2AP11388 IPO5P1-202ENST00000600039 287 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 MIR92B-201ENST00000607575 96 ntBASIC7.93□□□□□ -1.14
TOP2AP11388 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.93□□□□□ -1.14
TOP2AP11388 IQCB2P-201ENST00000401788 1633 ntBASIC7.92□□□□□ -1.14
TOP2AP11388 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TOP2AP11388 AL161912.2-201ENST00000565707 3007 ntBASIC7.92□□□□□ -1.14
TOP2AP11388 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
TOP2AP11388 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TOP2AP11388 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.92□□□□□ -1.14
TOP2AP11388 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC7.92□□□□□ -1.14
TOP2AP11388 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TOP2AP11388 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
TOP2AP11388 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TOP2AP11388 AL158163.1-201ENST00000603915 1649 ntBASIC7.92□□□□□ -1.14
TOP2AP11388 MIR372-201ENST00000362225 67 ntBASIC7.92□□□□□ -1.14
TOP2AP11388 AMZ2P2-201ENST00000406819 1057 ntBASIC7.92□□□□□ -1.14
TOP2AP11388 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.92□□□□□ -1.14
TOP2AP11388 EIF4A1P3-201ENST00000411521 244 ntBASIC7.92□□□□□ -1.14
TOP2AP11388 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.92□□□□□ -1.14
TOP2AP11388 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.92□□□□□ -1.14
TOP2AP11388 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.92□□□□□ -1.14
TOP2AP11388 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.92□□□□□ -1.14
TOP2AP11388 PRELID3BP3-201ENST00000584963 545 ntBASIC7.92□□□□□ -1.14
TOP2AP11388 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.92□□□□□ -1.14
TOP2AP11388 RNA5SP439-201ENST00000617595 124 ntBASIC7.92□□□□□ -1.14
TOP2AP11388 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC7.92□□□□□ -1.14
TOP2AP11388 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TOP2AP11388 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC7.91□□□□□ -1.14
TOP2AP11388 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
TOP2AP11388 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.91□□□□□ -1.14
TOP2AP11388 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
TOP2AP11388 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TOP2AP11388 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms