Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 BMS1P17-202ENST00000416720 316 ntBASIC4.83□□□□□ -1.64
SNX3O60493 AC093155.2-201ENST00000420734 937 ntBASIC4.83□□□□□ -1.64
SNX3O60493 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX3O60493 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.83□□□□□ -1.64
SNX3O60493 AC093414.1-201ENST00000434712 514 ntBASIC4.83□□□□□ -1.64
SNX3O60493 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SNX3O60493 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.83□□□□□ -1.64
SNX3O60493 RN7SL41P-201ENST00000476144 297 ntBASIC4.83□□□□□ -1.64
SNX3O60493 AC037198.2-201ENST00000478845 733 ntBASIC4.83□□□□□ -1.64
SNX3O60493 AC044810.1-201ENST00000480271 711 ntBASIC4.83□□□□□ -1.64
SNX3O60493 RPL7P6-201ENST00000480903 738 ntBASIC4.83□□□□□ -1.64
SNX3O60493 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNX3O60493 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.83□□□□□ -1.64
SNX3O60493 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX3O60493 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX3O60493 AC023158.1-201ENST00000561632 1025 ntBASIC4.83□□□□□ -1.64
SNX3O60493 MTND4LP25-201ENST00000570218 163 ntBASIC4.83□□□□□ -1.64
SNX3O60493 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNX3O60493 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX3O60493 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.83□□□□□ -1.64
SNX3O60493 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.83□□□□□ -1.64
SNX3O60493 AL158211.2-201ENST00000607282 395 ntBASIC4.83□□□□□ -1.64
SNX3O60493 AL049794.2-201ENST00000616301 365 ntBASIC4.83□□□□□ -1.64
SNX3O60493 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.83□□□□□ -1.64
SNX3O60493 MIR8080-201ENST00000622224 89 ntBASIC4.83□□□□□ -1.64
SNX3O60493 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX3O60493 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.83□□□□□ -1.64
SNX3O60493 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX3O60493 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNX3O60493 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX3O60493 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX3O60493 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
SNX3O60493 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX3O60493 AL359715.4-201ENST00000606629 1436 ntBASIC4.82□□□□□ -1.64
SNX3O60493 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX3O60493 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX3O60493 RNU4-44P-201ENST00000363050 141 ntBASIC4.82□□□□□ -1.64
SNX3O60493 SNORA70.10-201ENST00000384515 134 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AL160275.2-201ENST00000412010 394 ntBASIC4.82□□□□□ -1.64
SNX3O60493 VN1R37P-201ENST00000419096 748 ntBASIC4.82□□□□□ -1.64
SNX3O60493 ARL2BPP3-201ENST00000421226 480 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX3O60493 OR2AM1P-201ENST00000422137 422 ntBASIC4.82□□□□□ -1.64
SNX3O60493 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX3O60493 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX3O60493 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX3O60493 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX3O60493 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX3O60493 AC006326.1-201ENST00000445465 787 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AC104651.2-201ENST00000447549 528 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AL645937.3-201ENST00000453647 936 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.82□□□□□ -1.64
SNX3O60493 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.82□□□□□ -1.64
SNX3O60493 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX3O60493 RNA5SP360-201ENST00000516555 118 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AC060775.1-201ENST00000518241 520 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX3O60493 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX3O60493 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SNX3O60493 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.82□□□□□ -1.64
SNX3O60493 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.82□□□□□ -1.64
SNX3O60493 AC233266.2-201ENST00000567067 528 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AC209154.1-201ENST00000582156 337 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX3O60493 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX3O60493 RPL26P30-202ENST00000602923 645 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AC034236.3-201ENST00000605999 461 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AC073575.2-201ENST00000614212 627 ntBASIC4.82□□□□□ -1.64
SNX3O60493 MIR7154-201ENST00000620673 73 ntBASIC4.82□□□□□ -1.64
SNX3O60493 AC012414.7-202ENST00000622705 1090 ntBASIC4.82□□□□□ -1.64
SNX3O60493 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX3O60493 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX3O60493 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX3O60493 AC074101.1-201ENST00000637861 241 ntBASIC4.82□□□□□ -1.64
SNX3O60493 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX3O60493 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
SNX3O60493 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SNX3O60493 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX3O60493 HSPD1P14-201ENST00000432666 1618 ntBASIC4.82□□□□□ -1.64
SNX3O60493 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX3O60493 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX3O60493 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX3O60493 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.82□□□□□ -1.64
SNX3O60493 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX3O60493 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX3O60493 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX3O60493 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX3O60493 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX3O60493 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX3O60493 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX3O60493 SPATA2P1-201ENST00000431223 2055 ntBASIC4.81□□□□□ -1.64
SNX3O60493 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNX3O60493 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SNX3O60493 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX3O60493 RNA5SP46-201ENST00000362370 120 ntBASIC4.81□□□□□ -1.64
SNX3O60493 RPS24P12-201ENST00000402084 394 ntBASIC4.81□□□□□ -1.64
SNX3O60493 AL080315.1-201ENST00000406055 466 ntBASIC4.81□□□□□ -1.64
SNX3O60493 SNORA79B-201ENST00000410557 148 ntBASIC4.81□□□□□ -1.64
SNX3O60493 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms