Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 RN7SL329P-201ENST00000467740 299 ntBASIC4.75□□□□□ -1.65
PRKNO60260 AC108729.1-201ENST00000487812 947 ntBASIC4.75□□□□□ -1.65
PRKNO60260 RFPL4AP3-201ENST00000515267 345 ntBASIC4.75□□□□□ -1.65
PRKNO60260 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 AP003355.1-201ENST00000518956 587 ntBASIC4.75□□□□□ -1.65
PRKNO60260 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.75□□□□□ -1.65
PRKNO60260 AC027369.5-201ENST00000533838 755 ntBASIC4.75□□□□□ -1.65
PRKNO60260 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.75□□□□□ -1.65
PRKNO60260 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.75□□□□□ -1.65
PRKNO60260 AC022884.2-201ENST00000578535 580 ntBASIC4.75□□□□□ -1.65
PRKNO60260 MIR4691-201ENST00000583764 85 ntBASIC4.75□□□□□ -1.65
PRKNO60260 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.75□□□□□ -1.65
PRKNO60260 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.75□□□□□ -1.65
PRKNO60260 AC067838.1-201ENST00000606064 577 ntBASIC4.75□□□□□ -1.65
PRKNO60260 AC112503.2-201ENST00000609005 552 ntBASIC4.75□□□□□ -1.65
PRKNO60260 AC093799.2-201ENST00000610062 578 ntBASIC4.75□□□□□ -1.65
PRKNO60260 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.75□□□□□ -1.65
PRKNO60260 AP003476.1-201ENST00000623984 516 ntBASIC4.75□□□□□ -1.65
PRKNO60260 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 AC099654.9-201ENST00000637055 678 ntBASIC4.75□□□□□ -1.65
PRKNO60260 AC112255.1-201ENST00000624070 2493 ntBASIC4.75□□□□□ -1.65
PRKNO60260 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
PRKNO60260 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PRKNO60260 HSPA8P18-201ENST00000439846 1928 ntBASIC4.75□□□□□ -1.65
PRKNO60260 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.75□□□□□ -1.65
PRKNO60260 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PRKNO60260 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.74□□□□□ -1.65
PRKNO60260 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.74□□□□□ -1.65
PRKNO60260 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.74□□□□□ -1.65
PRKNO60260 THAP12P4-201ENST00000528321 2266 ntBASIC4.74□□□□□ -1.65
PRKNO60260 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.74□□□□□ -1.65
PRKNO60260 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PRKNO60260 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 AC010132.2-201ENST00000295493 1043 ntBASIC4.74□□□□□ -1.65
PRKNO60260 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PRKNO60260 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
PRKNO60260 AL024507.1-201ENST00000412741 274 ntBASIC4.74□□□□□ -1.65
PRKNO60260 GJA6P-201ENST00000415117 1042 ntBASIC4.74□□□□□ -1.65
PRKNO60260 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.74□□□□□ -1.65
PRKNO60260 MGAT2P2-201ENST00000427194 797 ntBASIC4.74□□□□□ -1.65
PRKNO60260 AC046176.1-201ENST00000435260 1170 ntBASIC4.74□□□□□ -1.65
PRKNO60260 CEACAMP7-201ENST00000444105 496 ntBASIC4.74□□□□□ -1.65
PRKNO60260 RPL32P14-201ENST00000463196 378 ntBASIC4.74□□□□□ -1.65
PRKNO60260 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.74□□□□□ -1.65
PRKNO60260 HMGN2P25-201ENST00000486956 268 ntBASIC4.74□□□□□ -1.65
PRKNO60260 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.74□□□□□ -1.65
PRKNO60260 GTF2IP9-201ENST00000502460 301 ntBASIC4.74□□□□□ -1.65
PRKNO60260 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.74□□□□□ -1.65
PRKNO60260 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.74□□□□□ -1.65
PRKNO60260 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.74□□□□□ -1.65
PRKNO60260 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.74□□□□□ -1.65
PRKNO60260 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.74□□□□□ -1.65
PRKNO60260 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.74□□□□□ -1.65
PRKNO60260 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.74□□□□□ -1.65
PRKNO60260 AL121594.4-201ENST00000556211 1196 ntBASIC4.74□□□□□ -1.65
PRKNO60260 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.74□□□□□ -1.65
PRKNO60260 MIR4443-201ENST00000585052 53 ntBASIC4.74□□□□□ -1.65
PRKNO60260 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.74□□□□□ -1.65
PRKNO60260 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 AC026741.1-201ENST00000605892 482 ntBASIC4.74□□□□□ -1.65
PRKNO60260 OR8G7P-201ENST00000616658 848 ntBASIC4.74□□□□□ -1.65
PRKNO60260 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.74□□□□□ -1.65
PRKNO60260 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PRKNO60260 FRG1DP-201ENST00000635586 771 ntBASIC4.74□□□□□ -1.65
PRKNO60260 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
PRKNO60260 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.74□□□□□ -1.65
PRKNO60260 NXF4-202ENST00000416098 1465 ntBASIC4.74□□□□□ -1.65
PRKNO60260 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRKNO60260 AC003985.2-201ENST00000562268 1669 ntBASIC4.73□□□□□ -1.65
PRKNO60260 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.73□□□□□ -1.65
PRKNO60260 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.73□□□□□ -1.65
PRKNO60260 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PRKNO60260 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 AC010266.2-201ENST00000564741 3255 ntBASIC4.73□□□□□ -1.65
PRKNO60260 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PRKNO60260 RN7SKP104-201ENST00000362605 328 ntBASIC4.73□□□□□ -1.65
PRKNO60260 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms