Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC104164.3-201ENST00000467363 1258 ntBASIC5.19□□□□□ -1.58
LDB2O43679 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LDB2O43679 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 GTF2F2P1-201ENST00000511083 675 ntBASIC5.19□□□□□ -1.58
LDB2O43679 RNA5SP230-201ENST00000517039 122 ntBASIC5.19□□□□□ -1.58
LDB2O43679 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.19□□□□□ -1.58
LDB2O43679 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.19□□□□□ -1.58
LDB2O43679 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.19□□□□□ -1.58
LDB2O43679 AC087894.1-201ENST00000538359 518 ntBASIC5.19□□□□□ -1.58
LDB2O43679 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.19□□□□□ -1.58
LDB2O43679 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 HAUS8P1-201ENST00000549005 542 ntBASIC5.19□□□□□ -1.58
LDB2O43679 AL121839.1-201ENST00000556233 1185 ntBASIC5.19□□□□□ -1.58
LDB2O43679 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.19□□□□□ -1.58
LDB2O43679 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.19□□□□□ -1.58
LDB2O43679 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LDB2O43679 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.19□□□□□ -1.58
LDB2O43679 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.19□□□□□ -1.58
LDB2O43679 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.19□□□□□ -1.58
LDB2O43679 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.19□□□□□ -1.58
LDB2O43679 AC005021.1-201ENST00000608730 355 ntBASIC5.19□□□□□ -1.58
LDB2O43679 AC108359.1-201ENST00000616451 1211 ntBASIC5.19□□□□□ -1.58
LDB2O43679 AC018445.2-201ENST00000622987 260 ntBASIC5.19□□□□□ -1.58
LDB2O43679 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.19□□□□□ -1.58
LDB2O43679 OR6C71P-202ENST00000641886 1107 ntBASIC5.19□□□□□ -1.58
LDB2O43679 SAMMSON-227ENST00000642114 1199 ntBASIC5.19□□□□□ -1.58
LDB2O43679 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDB2O43679 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LDB2O43679 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.19□□□□□ -1.58
LDB2O43679 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
LDB2O43679 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 AC011503.2-201ENST00000594230 1500 ntBASIC5.18□□□□□ -1.58
LDB2O43679 PANDAR-201ENST00000629595 1506 ntBASIC5.18□□□□□ -1.58
LDB2O43679 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.18□□□□□ -1.58
LDB2O43679 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LDB2O43679 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.18□□□□□ -1.58
LDB2O43679 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.18□□□□□ -1.58
LDB2O43679 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 MTCO2P23-201ENST00000425216 680 ntBASIC5.18□□□□□ -1.58
LDB2O43679 NANOGP4-201ENST00000427230 913 ntBASIC5.18□□□□□ -1.58
LDB2O43679 PTMAP6-201ENST00000439110 327 ntBASIC5.18□□□□□ -1.58
LDB2O43679 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.18□□□□□ -1.58
LDB2O43679 MTND6P5-201ENST00000448266 512 ntBASIC5.18□□□□□ -1.58
LDB2O43679 RPL32P9-201ENST00000487963 407 ntBASIC5.18□□□□□ -1.58
LDB2O43679 AC008953.1-201ENST00000497334 318 ntBASIC5.18□□□□□ -1.58
LDB2O43679 NIFKP7-201ENST00000503365 834 ntBASIC5.18□□□□□ -1.58
LDB2O43679 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.18□□□□□ -1.58
LDB2O43679 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.18□□□□□ -1.58
LDB2O43679 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.18□□□□□ -1.58
LDB2O43679 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.18□□□□□ -1.58
LDB2O43679 AGGF1P9-201ENST00000561884 913 ntBASIC5.18□□□□□ -1.58
LDB2O43679 AC008507.2-201ENST00000588402 1176 ntBASIC5.18□□□□□ -1.58
LDB2O43679 AC119501.1-201ENST00000603646 475 ntBASIC5.18□□□□□ -1.58
LDB2O43679 AC069431.2-201ENST00000604149 1099 ntBASIC5.18□□□□□ -1.58
LDB2O43679 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.18□□□□□ -1.58
LDB2O43679 AC112503.1-201ENST00000608436 391 ntBASIC5.18□□□□□ -1.58
LDB2O43679 AC084824.4-201ENST00000620106 731 ntBASIC5.18□□□□□ -1.58
LDB2O43679 AC015722.2-201ENST00000622210 551 ntBASIC5.18□□□□□ -1.58
LDB2O43679 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.18□□□□□ -1.58
LDB2O43679 AC126544.2-201ENST00000625174 749 ntBASIC5.18□□□□□ -1.58
LDB2O43679 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.18□□□□□ -1.58
LDB2O43679 ZNF90P1-201ENST00000480493 1951 ntBASIC5.18□□□□□ -1.58
LDB2O43679 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDB2O43679 AL450345.1-202ENST00000605741 3881 ntBASIC5.18□□□□□ -1.58
LDB2O43679 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.18□□□□□ -1.58
LDB2O43679 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.17□□□□□ -1.58
LDB2O43679 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 AL022311.1-201ENST00000623726 19416 ntBASIC5.17□□□□□ -1.58
LDB2O43679 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 RNU1-43P-201ENST00000365052 165 ntBASIC5.17□□□□□ -1.58
LDB2O43679 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LDB2O43679 RNA5SP187-201ENST00000384400 119 ntBASIC5.17□□□□□ -1.58
LDB2O43679 MIR600-201ENST00000385007 98 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms