Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC025458.1-201ENST00000506046 166 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC005351.1-201ENST00000511152 786 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.58□□□□□ -1.52
PHGDHO43175 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC119751.5-201ENST00000514077 770 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 HMGB1P23-201ENST00000518743 568 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 AP001636.2-201ENST00000525517 696 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.58□□□□□ -1.52
PHGDHO43175 NIFKP8-201ENST00000560500 874 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC069366.1-201ENST00000583159 838 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.58□□□□□ -1.52
PHGDHO43175 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC016877.3-201ENST00000606778 504 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.58□□□□□ -1.52
PHGDHO43175 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 SAMMSON-209ENST00000641222 1100 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.58□□□□□ -1.52
PHGDHO43175 AC068870.3-201ENST00000625077 2536 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PHGDHO43175 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.58□□□□□ -1.52
PHGDHO43175 ZNF876P-202ENST00000398732 1485 ntBASIC5.58□□□□□ -1.52
PHGDHO43175 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHGDHO43175 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 AC007342.5-201ENST00000571340 2142 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.57□□□□□ -1.52
PHGDHO43175 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.57□□□□□ -1.52
PHGDHO43175 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.57□□□□□ -1.52
PHGDHO43175 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 GAPDHP24-201ENST00000328713 983 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 RN7SKP69-201ENST00000365390 305 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 RNA5SP30-201ENST00000365552 115 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 RNU6-317P-201ENST00000384031 107 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.57□□□□□ -1.52
PHGDHO43175 OR4K6P-201ENST00000416478 897 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AC027644.1-201ENST00000419595 298 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.57□□□□□ -1.52
PHGDHO43175 MOB1AP1-201ENST00000430903 535 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 FTLP19-201ENST00000433300 394 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.57□□□□□ -1.52
PHGDHO43175 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.57□□□□□ -1.52
PHGDHO43175 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.57□□□□□ -1.52
PHGDHO43175 AL606490.1-201ENST00000452266 765 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 SEPT7P3-201ENST00000455017 621 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.57□□□□□ -1.52
PHGDHO43175 NXT1P1-201ENST00000458481 316 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.57□□□□□ -1.52
PHGDHO43175 RPL23AP12-201ENST00000467573 473 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 RN7SL741P-201ENST00000482473 289 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 ATP5LP5-201ENST00000483050 299 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 RPSAP51-201ENST00000497462 645 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.57□□□□□ -1.52
PHGDHO43175 AC092593.2-201ENST00000513866 913 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 MRPS36P3-201ENST00000519284 130 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 OR8A2P-201ENST00000528631 952 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 PMS2P3-207ENST00000529061 717 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 MTCO2P15-201ENST00000532655 656 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 OR4A43P-201ENST00000532938 908 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 AC023050.2-201ENST00000544968 387 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.57□□□□□ -1.52
PHGDHO43175 AC145350.1-201ENST00000567426 208 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.57□□□□□ -1.52
PHGDHO43175 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.57□□□□□ -1.52
PHGDHO43175 MIR5708-201ENST00000579723 85 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.57□□□□□ -1.52
PHGDHO43175 AC010503.3-201ENST00000594355 540 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 VN1R83P-201ENST00000595685 445 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AC021749.1-201ENST00000604322 607 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AL392112.1-201ENST00000605115 829 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.57□□□□□ -1.52
PHGDHO43175 AC097065.2-201ENST00000608159 533 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AP000238.1-201ENST00000608759 426 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AC024257.5-201ENST00000612739 531 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 AP002967.1-201ENST00000624203 539 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 CU459211.1-201ENST00000635667 749 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms