Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC28A1O00337 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AC104687.2-201ENST00000604442 342 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC023813.4-201ENST00000607580 580 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AL049794.2-201ENST00000616301 365 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC026124.2-201ENST00000621847 656 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC145207.9-201ENST00000623802 325 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AP003499.2-201ENST00000624100 483 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC28A1O00337 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SLC28A1O00337 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC28A1O00337 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
SLC28A1O00337 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC28A1O00337 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AC083843.3-201ENST00000623679 2186 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC28A1O00337 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC28A1O00337 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC28A1O00337 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC28A1O00337 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC28A1O00337 SOCS5P3-201ENST00000425115 1576 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 DDX18P5-201ENST00000534547 1306 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC28A1O00337 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC28A1O00337 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC28A1O00337 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC28A1O00337 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC28A1O00337 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SLC28A1O00337 DUTP5-201ENST00000406790 469 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC28A1O00337 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.79□□□□□ -1.64
SLC28A1O00337 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC28A1O00337 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC28A1O00337 CFL1P1-202ENST00000432948 411 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC28A1O00337 AC020890.1-201ENST00000491837 504 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC28A1O00337 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC28A1O00337 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC28A1O00337 Y_RNA.719-201ENST00000517156 106 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC28A1O00337 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC28A1O00337 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 NMNAT1P1-201ENST00000554095 876 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC28A1O00337 AC015802.5-201ENST00000607478 399 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC28A1O00337 AC104307.1-201ENST00000616142 196 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 AL121890.2-201ENST00000617644 465 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 AC079298.2-201ENST00000623885 459 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SLC28A1O00337 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC28A1O00337 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC28A1O00337 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC28A1O00337 CASC19-284ENST00000642142 1868 ntBASIC4.79□□□□□ -1.64
SLC28A1O00337 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC28A1O00337 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
SLC28A1O00337 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC28A1O00337 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC28A1O00337 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC28A1O00337 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC28A1O00337 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC28A1O00337 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC28A1O00337 ECM1P2-201ENST00000503354 1577 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC28A1O00337 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC28A1O00337 AC017002.4-201ENST00000604721 1525 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC28A1O00337 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SLC28A1O00337 U3.2-201ENST00000362981 210 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 RN7SKP160-201ENST00000363804 340 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 RNU6-31P-201ENST00000384388 108 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 RNU6-883P-201ENST00000384597 107 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 SNORA66-201ENST00000384792 133 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SLC28A1O00337 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC28A1O00337 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC28A1O00337 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC28A1O00337 RPL35AP24-201ENST00000413846 330 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 DDX39BP1-205ENST00000422507 192 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 AL389925.1-201ENST00000432257 728 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC28A1O00337 OR52B5P-201ENST00000435337 951 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 OR7E125P-201ENST00000443450 846 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 MRPL48P1-201ENST00000445390 636 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC28A1O00337 TCEA1P1-201ENST00000449716 880 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 IGHV5-78-201ENST00000450948 295 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 MTND2P3-201ENST00000452458 470 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 TPRKBP1-201ENST00000456243 481 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 PSMC1P13-201ENST00000458195 985 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC28A1O00337 AC097484.1-201ENST00000471148 389 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 RPS4XP1-201ENST00000482189 787 ntBASIC4.78□□□□□ -1.64
SLC28A1O00337 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC28A1O00337 HMGB1P3-201ENST00000502802 616 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms