Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 AC027455.1-201ENST00000574104 594 ntBASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 AC115989.2-201ENST00000578640 563 ntBASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 AC127024.6-201ENST00000621598 424 ntBASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 AC006453.5-201ENST00000636451 619 ntBASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC3.84□□□□□ -1.79
RBFOX3A6NFN3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RBFOX3A6NFN3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
RBFOX3A6NFN3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
RBFOX3A6NFN3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC3.84□□□□□ -1.8
RBFOX3A6NFN3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RBFOX3A6NFN3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC068254.2-201ENST00000623938 3577 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 MIR365B-201ENST00000362317 111 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AL645733.1-201ENST00000402250 217 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 LYPLA1P3-201ENST00000402650 695 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 RNA5SP104-201ENST00000410989 118 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC099336.2-201ENST00000422457 254 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 RPL23AP4-201ENST00000427757 463 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 CASP3P1-201ENST00000446037 609 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC104651.2-201ENST00000447549 528 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 YWHAEP1-201ENST00000453697 763 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 SETP20-201ENST00000457046 852 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC099560.2-201ENST00000457554 255 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 RPL7P51-201ENST00000490532 749 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC025445.1-201ENST00000502728 300 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 HMGB3P13-201ENST00000511263 607 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 SNORA43.3-201ENST00000517240 103 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 CYCSP22-201ENST00000517555 339 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC022826.1-201ENST00000519383 805 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC069240.1-201ENST00000548774 375 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 DYNLL1P4-201ENST00000549314 266 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 SNX6P1-201ENST00000601728 1224 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC009704.2-201ENST00000618739 483 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AC132068.1-201ENST00000623805 459 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 VN2R3P-201ENST00000422626 1412 ntBASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RBFOX3A6NFN3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AL592182.3-201ENST00000642132 3304 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 OR56B2P-201ENST00000317102 954 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 U3.3-201ENST00000362986 216 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 SNORA70-201ENST00000384436 135 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms