Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 MTCYBP13-201ENST00000578634 1093 ntBASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 SNORD39.2-201ENST00000579995 76 ntBASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 AL355802.4-201ENST00000607635 548 ntBASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 AC133644.2-201ENST00000608142 540 ntBASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 AC084036.1-201ENST00000609190 508 ntBASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 SOCS5P3-201ENST00000425115 1576 ntBASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 AL136520.1-201ENST00000600311 1322 ntBASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.45□□□□□ -1.54
SNX9Q9Y5X1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 SNORA27.3-201ENST00000364937 134 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 SNORA66-201ENST00000384792 133 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AL645733.1-201ENST00000402250 217 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AL035079.1-201ENST00000405210 287 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AMZ2P2-201ENST00000406819 1057 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 RNA5SP296-201ENST00000410523 111 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 OR6C64P-201ENST00000419708 825 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 NPM1P22-201ENST00000427761 952 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC023141.6-201ENST00000429418 337 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 TXNP2-201ENST00000443918 295 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC018635.1-201ENST00000468292 1030 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 COX6B1P5-201ENST00000509843 249 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC016559.2-201ENST00000510759 359 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 OR7E10P-201ENST00000526420 991 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 OR7E128P-201ENST00000532736 1024 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC005000.1-201ENST00000536192 288 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC090330.1-201ENST00000588646 764 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AP003117.1-201ENST00000602771 554 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC005776.1-201ENST00000603164 290 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC242628.1-201ENST00000606810 391 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 LINC00216-201ENST00000623548 1126 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX9Q9Y5X1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 THAP12P5-201ENST00000405864 2275 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 RNA5SP123-201ENST00000363244 119 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AL078599.1-201ENST00000402075 293 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms