Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 RNA5SP428-201ENST00000365129 132 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AL121834.1-202ENST00000404494 277 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AP002530.1-201ENST00000405705 684 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AC013268.2-201ENST00000420753 337 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 EIF4EP1-201ENST00000422311 642 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 RPS27P18-201ENST00000431701 247 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 RPS17P2-201ENST00000461663 408 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 RN7SL517P-201ENST00000462240 305 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AC104849.1-201ENST00000462623 405 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 RN7SL319P-201ENST00000480656 221 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AC004815.1-201ENST00000484185 331 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 Y_RNA.719-201ENST00000517156 106 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AC125612.1-201ENST00000547580 377 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 MIR4691-201ENST00000583764 85 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 RPL26P30-202ENST00000602923 645 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AC005377.1-201ENST00000605126 456 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AP001521.2-201ENST00000608772 546 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AP005212.4-201ENST00000614206 710 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AL049794.2-201ENST00000616301 365 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 NEAT1-202ENST00000501122 22743 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 AC091046.3-201ENST00000631455 1574 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 CASC19-281ENST00000642118 1554 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.48□□□□□ -1.69
TRAPPC4Q9Y296 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC007382.1-201ENST00000624376 2618 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC008549.2-201ENST00000333482 706 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 SNORA73.1-201ENST00000363107 205 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 RNU1-83P-201ENST00000363426 164 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 SNORA70.10-201ENST00000384515 134 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 QRSL1P2-201ENST00000418582 964 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 OR2X1P-201ENST00000421144 687 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 GTF2IP2-201ENST00000424290 697 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AL137845.2-201ENST00000444292 988 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AL691482.1-201ENST00000453255 87 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 RN7SL97P-201ENST00000486780 299 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 RN7SL214P-201ENST00000487317 265 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC087763.1-201ENST00000603391 286 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC087468.1-201ENST00000604365 630 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC004232.3-201ENST00000622977 525 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC005086.4-201ENST00000623065 213 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC243960.7-201ENST00000623532 707 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AL353662.3-201ENST00000625131 237 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC107068.1-201ENST00000563286 4218 ntBASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
TRAPPC4Q9Y296 AC109780.1-201ENST00000451768 1344 ntBASIC4.46□□□□□ -1.69
TRAPPC4Q9Y296 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRAPPC4Q9Y296 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TRAPPC4Q9Y296 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
TRAPPC4Q9Y296 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.46□□□□□ -1.7
TRAPPC4Q9Y296 AL359922.3-201ENST00000624779 1670 ntBASIC4.46□□□□□ -1.7
TRAPPC4Q9Y296 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TRAPPC4Q9Y296 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRAPPC4Q9Y296 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TRAPPC4Q9Y296 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms