Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MFSD8-220ENST00000641243 1422 ntBASIC5.94□□□□□ -1.46
SCN11AQ9UI33 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN11AQ9UI33 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 AC011933.1-201ENST00000413334 321 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 RPL7P32-201ENST00000457119 744 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 AC116533.1-201ENST00000459748 321 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 MIR6891-201ENST00000618788 93 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 SNORA48.7-201ENST00000391302 135 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 GAPDHP49-201ENST00000421421 961 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 RPS29P17-201ENST00000430795 166 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 DHFRP3-201ENST00000455595 559 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 AC108475.1-201ENST00000507880 950 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 PGBD4P4-201ENST00000509673 613 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 MIR4660-201ENST00000583549 74 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 AL035461.2-201ENST00000619201 524 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 OR2L1P-202ENST00000641567 1023 ntBASIC5.93□□□□□ -1.46
SCN11AQ9UI33 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN11AQ9UI33 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 SNORA37-201ENST00000384504 129 ntBASIC5.92□□□□□ -1.46
SCN11AQ9UI33 SDHCP2-201ENST00000398565 501 ntBASIC5.92□□□□□ -1.46
SCN11AQ9UI33 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 RPL23AP43-201ENST00000446445 471 ntBASIC5.92□□□□□ -1.46
SCN11AQ9UI33 ISCUP1-201ENST00000454451 448 ntBASIC5.92□□□□□ -1.46
SCN11AQ9UI33 CYCSP34-201ENST00000458172 304 ntBASIC5.92□□□□□ -1.46
SCN11AQ9UI33 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 AC073136.1-201ENST00000449426 2884 ntBASIC5.92□□□□□ -1.46
SCN11AQ9UI33 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCN11AQ9UI33 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 PCAT14-202ENST00000627127 3935 ntBASIC5.91□□□□□ -1.46
SCN11AQ9UI33 MIR383-201ENST00000362257 73 ntBASIC5.91□□□□□ -1.46
SCN11AQ9UI33 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 RPL21P43-201ENST00000425440 472 ntBASIC5.91□□□□□ -1.46
SCN11AQ9UI33 RPS27AP12-201ENST00000429552 465 ntBASIC5.91□□□□□ -1.46
SCN11AQ9UI33 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 RNA5SP143-201ENST00000516936 115 ntBASIC5.91□□□□□ -1.46
SCN11AQ9UI33 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 AC020634.1-201ENST00000608701 549 ntBASIC5.91□□□□□ -1.46
SCN11AQ9UI33 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 DDX18P5-201ENST00000534547 1306 ntBASIC5.91□□□□□ -1.46
SCN11AQ9UI33 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN11AQ9UI33 AL359837.1-201ENST00000381357 287 ntBASIC5.9□□□□□ -1.46
SCN11AQ9UI33 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.9□□□□□ -1.46
SCN11AQ9UI33 NPM1P26-201ENST00000426339 738 ntBASIC5.9□□□□□ -1.46
SCN11AQ9UI33 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SCN11AQ9UI33 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.9□□□□□ -1.46
SCN11AQ9UI33 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.9□□□□□ -1.46
SCN11AQ9UI33 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.9□□□□□ -1.46
SCN11AQ9UI33 AC104651.2-201ENST00000447549 528 ntBASIC5.9□□□□□ -1.46
SCN11AQ9UI33 AC053481.1-201ENST00000467217 306 ntBASIC5.9□□□□□ -1.46
SCN11AQ9UI33 RN7SL691P-201ENST00000494487 301 ntBASIC5.9□□□□□ -1.46
SCN11AQ9UI33 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.9□□□□□ -1.46
SCN11AQ9UI33 NPM1P5-201ENST00000557228 838 ntBASIC5.9□□□□□ -1.46
SCN11AQ9UI33 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.9□□□□□ -1.46
SCN11AQ9UI33 AC084783.1-201ENST00000565846 910 ntBASIC5.9□□□□□ -1.46
SCN11AQ9UI33 AC015804.1-201ENST00000622935 435 ntBASIC5.9□□□□□ -1.46
SCN11AQ9UI33 AC140479.6-201ENST00000633535 357 ntBASIC5.9□□□□□ -1.46
SCN11AQ9UI33 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
SCN11AQ9UI33 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SCN11AQ9UI33 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms