Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNA5SP303-201ENST00000516192 130 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AL121873.1-201ENST00000616013 524 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 MAPK10-349ENST00000641767 3661 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AL592148.3-201ENST00000608771 2646 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 AL137141.1-201ENST00000624622 4836 ntBASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KIAA1549Q9HCM3 CHIAP3-201ENST00000423668 1133 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 EIF2S2P3-201ENST00000428356 999 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 RPS23P7-201ENST00000466210 444 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC026979.1-201ENST00000492525 396 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 C1GALT1P3-201ENST00000522049 819 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC068831.8-201ENST00000620171 435 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AL731532.2-201ENST00000623542 1953 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AL603750.1-201ENST00000624216 1717 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 SNORD113.2-201ENST00000364166 89 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AL049693.1-201ENST00000402760 611 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 LINC00993-201ENST00000420453 540 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 RPL21P133-201ENST00000443666 476 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC069304.1-201ENST00000491593 704 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC091868.1-201ENST00000508746 304 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 RN7SKP92-201ENST00000517266 244 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 BUD31P1-201ENST00000521828 359 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC012557.1-201ENST00000607115 611 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC009704.2-201ENST00000618739 483 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC000374.1-201ENST00000434698 1745 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 AC107068.1-201ENST00000563286 4218 ntBASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KIAA1549Q9HCM3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC026523.2-201ENST00000625039 7739 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 OR1F12-201ENST00000402365 945 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 TMBIM7P-201ENST00000418074 855 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC010435.1-201ENST00000623353 1177 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 U3.53-201ENST00000628922 216 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms