Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AL138820.1-201ENST00000617901 5305 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC235565.1-201ENST00000456962 1325 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 MFSD8-213ENST00000641134 1327 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC079298.1-201ENST00000625026 1619 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 RNU4-2-201ENST00000365668 141 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 SNORA70-201ENST00000384436 135 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 RNA5SP241-201ENST00000391326 114 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 SNORA79B-201ENST00000410557 148 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 RPS27P18-201ENST00000431701 247 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 MTND2P5-201ENST00000432656 1006 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC099063.2-201ENST00000446360 662 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 EIF2S2P2-201ENST00000447161 982 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 SBDSP1-204ENST00000453858 737 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 MTCO2P6-201ENST00000463134 685 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 RN7SL547P-201ENST00000490793 290 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC005412.2-201ENST00000492004 341 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC109464.1-201ENST00000511091 819 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC027026.1-201ENST00000532323 742 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 OR10G5P-201ENST00000532733 358 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AL132857.1-201ENST00000555180 708 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC044860.2-201ENST00000561005 179 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 FKBP1AP1-201ENST00000594588 318 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 MTCO2P22-201ENST00000603246 681 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AL160237.3-201ENST00000604114 1013 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC093424.1-201ENST00000604999 338 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 Z99289.3-201ENST00000605586 594 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AL512329.2-201ENST00000607350 548 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC016769.4-201ENST00000616893 535 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AL158062.1-201ENST00000619632 745 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AC007342.5-201ENST00000571340 2142 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 SNORA58B-201ENST00000364259 136 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 MIR937-201ENST00000401271 86 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 RPL26P37-201ENST00000411983 438 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 HSPD1P12-201ENST00000429127 1069 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AL390119.1-201ENST00000440329 312 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AL353898.1-201ENST00000444055 238 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 RN7SL51P-201ENST00000468230 285 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AP000797.2-201ENST00000475768 606 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 OR11I1P-201ENST00000486033 954 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AC091163.3-201ENST00000518269 1144 ntBASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.56□□□□□ -1.52
USP29Q9HBJ7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms