Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A2Q9H9S3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 LINC01613-201ENST00000561476 2780 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AL121657.1-201ENST00000327215 531 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 RNU6-500P-201ENST00000362349 107 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 RNA5SP279-201ENST00000365513 117 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 LCN1P2-201ENST00000372030 223 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 TCEA1P4-201ENST00000415066 844 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 RPL21P50-201ENST00000417698 477 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 VN1R20P-201ENST00000425215 966 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 YWHAEP5-201ENST00000431545 765 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC234064.1-201ENST00000436312 247 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 LARP1BP3-201ENST00000437229 869 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 TCEA1P3-201ENST00000443005 880 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC023512.1-201ENST00000444513 499 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AL022237.1-201ENST00000446663 358 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 REG1CP-206ENST00000447469 496 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 RN7SL221P-201ENST00000466190 281 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC072039.1-201ENST00000477611 581 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 RPL23AP37-201ENST00000479658 549 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 RN7SL741P-201ENST00000482473 289 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 ST13P12-201ENST00000508958 1094 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 KRT19P6-201ENST00000510983 209 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC023632.1-201ENST00000518463 375 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AP001207.1-201ENST00000524051 481 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 OR5AK3P-201ENST00000527486 1297 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC092747.2-201ENST00000545069 983 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC074029.1-201ENST00000552531 1044 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AL121839.1-201ENST00000556233 1185 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC121758.1-202ENST00000556917 658 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 OR4H6P-201ENST00000563771 921 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 RBM22P12-201ENST00000567098 1255 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 ATP5F1P7-201ENST00000567330 760 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 OR1E3-201ENST00000575608 948 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC026898.1-201ENST00000586404 571 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC092354.1-201ENST00000606057 376 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC009779.8-202ENST00000607990 932 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC025253.1-201ENST00000613623 543 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AP004607.9-201ENST00000618202 316 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC135068.5-201ENST00000624197 983 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 OR5AK4P-201ENST00000635912 903 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC087821.2-201ENST00000637086 450 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AC083837.1-201ENST00000565297 2994 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 MSL3P1-202ENST00000440028 1468 ntBASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.57□□□□□ -1.52
SEC61A2Q9H9S3 MRRFP1-201ENST00000435941 1675 ntBASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SEC61A2Q9H9S3 AC117409.1-201ENST00000470499 1310 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms