Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 GTF2IP12-201ENST00000456547 356 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC093899.1-201ENST00000457984 376 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC090589.1-201ENST00000473109 362 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 SYPL1P1-201ENST00000473622 768 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 RN7SL547P-201ENST00000490793 290 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC108693.1-201ENST00000496068 432 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 NDUFB4P12-201ENST00000513465 390 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 IGLV3-24-201ENST00000517477 197 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 KCTD9P6-201ENST00000522306 950 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 DEFB130C-202ENST00000530001 230 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC095057.3-201ENST00000567102 1157 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC022069.1-201ENST00000582910 658 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 U1.25-201ENST00000614085 162 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 U1.34-201ENST00000618578 162 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 U1.31-201ENST00000620022 160 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AL590240.3-201ENST00000621416 943 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 AC092451.3-201ENST00000625067 1343 ntBASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.41□□□□□ -1.38
BCAS3Q9H6U6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 MTND5P24-201ENST00000438892 1767 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 MIR130A-201ENST00000385274 89 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AL121977.1-201ENST00000401636 979 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC246680.2-201ENST00000422106 389 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC113412.1-201ENST00000425840 504 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AL593851.1-201ENST00000426171 157 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC124944.2-201ENST00000429866 1242 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC244035.1-201ENST00000430042 390 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 RPS24P1-201ENST00000438550 371 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 CASP3P1-201ENST00000446037 609 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 RPL12P39-201ENST00000455456 496 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC011225.1-201ENST00000457751 369 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 RN7SL515P-201ENST00000463999 297 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC090114.3-201ENST00000479267 829 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 RPL7P41-201ENST00000485823 957 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 IGBP1P1-201ENST00000554337 1009 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC103968.1-201ENST00000557841 573 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 MRPS21P7-201ENST00000566937 238 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 MIR1269B-201ENST00000580405 75 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 PRELID3BP3-201ENST00000584963 545 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC093765.1-201ENST00000603758 881 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC106791.2-201ENST00000604680 391 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC092653.1-201ENST00000608509 531 ntBASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
BCAS3Q9H6U6 AC117409.1-201ENST00000470499 1310 ntBASIC6.4□□□□□ -1.39
BCAS3Q9H6U6 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
BCAS3Q9H6U6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.4□□□□□ -1.39
BCAS3Q9H6U6 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
BCAS3Q9H6U6 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
BCAS3Q9H6U6 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
BCAS3Q9H6U6 AC011503.2-201ENST00000594230 1500 ntBASIC6.4□□□□□ -1.39
BCAS3Q9H6U6 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms