Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RPS17P15-201ENST00000475609 349 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC022215.1-201ENST00000481770 362 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 RPL23AP44-201ENST00000482216 473 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 RN7SL741P-201ENST00000482473 289 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC011037.1-201ENST00000483964 558 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 RPL32P33-201ENST00000487023 394 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 NENFP3-201ENST00000503735 313 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 RN7SKP70-201ENST00000516655 271 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC060775.1-201ENST00000518241 520 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 MTCO3P15-201ENST00000526563 574 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 OR5AM1P-201ENST00000532136 1032 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC107958.1-201ENST00000556576 290 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC122134.1-201ENST00000565664 1104 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC092121.1-201ENST00000569452 202 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC067773.1-201ENST00000603284 1094 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC007349.4-201ENST00000608114 532 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 U6.107-201ENST00000637108 79 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 ZNF663P-202ENST00000641770 1131 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 MUC2-202ENST00000613187 4845 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 AC011933.2-201ENST00000578539 2790 ntBASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM54Q9BYV2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AC093311.1-201ENST00000506586 2021 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AC023490.2-201ENST00000359859 470 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 RNU1-87P-201ENST00000363727 170 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 RNA5SP500-201ENST00000364486 119 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 RN7SKP275-201ENST00000364626 301 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 RNU6-1242P-201ENST00000391052 103 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 OR7E101P-201ENST00000400428 513 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 MTND4P13-201ENST00000402078 1023 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 RPS3AP2-201ENST00000407190 754 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 Z75741.2-201ENST00000417272 1167 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 SETP8-201ENST00000435341 628 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 NANOGP2-201ENST00000435391 727 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 PCBP2P1-201ENST00000437262 977 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 PTENP1-201ENST00000447117 1215 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 NXT1P1-201ENST00000458481 316 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 SNORD125-201ENST00000459538 96 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 ATP5LP5-201ENST00000483050 299 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 RPL37P23-201ENST00000492641 294 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 RNA5SP271-201ENST00000516700 88 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 snoZ278.1-201ENST00000517059 112 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 IGKV2D-10-201ENST00000520194 281 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 TRIM77BP-201ENST00000524985 1119 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AC137627.1-201ENST00000545761 289 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 ZNF92P3-201ENST00000596594 954 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms