Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 MAPK10-303ENST00000641324 3959 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 OR7E156P-201ENST00000400303 464 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 RN7SKP114-201ENST00000410327 279 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC115283.1-201ENST00000427353 400 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC011753.3-201ENST00000443436 406 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AL513343.1-201ENST00000451818 792 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC133473.1-201ENST00000455173 299 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC019084.1-201ENST00000457337 432 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC008410.1-201ENST00000483777 339 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 RNA5SP154-201ENST00000516193 111 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 RNA5SP473-201ENST00000516402 125 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC079075.1-201ENST00000559543 878 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 SLC25A36P1-201ENST00000590111 465 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 MIR6889-201ENST00000613185 59 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC006453.5-201ENST00000636451 619 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AL139254.3-201ENST00000641097 674 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 GCNT6-201ENST00000379591 934 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 RPS3P2-201ENST00000421346 701 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC108075.1-201ENST00000424692 529 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 BX119904.1-201ENST00000432026 348 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC004938.1-201ENST00000438468 308 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 MTND6P18-201ENST00000439477 513 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 SNRPFP2-201ENST00000440710 251 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 RPL36AP39-201ENST00000445859 318 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 RPS26P41-201ENST00000450370 284 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC239798.3-201ENST00000454459 408 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC007998.1-201ENST00000474156 672 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC093270.2-201ENST00000486157 792 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 RN7SL558P-201ENST00000497468 299 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC010350.1-201ENST00000504908 231 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC087477.6-201ENST00000559595 843 ntBASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC28BQ9BUN5 VN1R81P-201ENST00000602085 372 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms