Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AP001052.1-201ENST00000626421 99 ntBASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 PARP4P1-201ENST00000435945 2337 ntBASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 PRNCR1-201ENST00000635449 12727 ntBASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 MTND4P14-201ENST00000435799 1354 ntBASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 SALL4P7-201ENST00000555779 3120 ntBASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEDD1Q8NHV4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AL132640.2-201ENST00000559968 1698 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 TNPO1P2-201ENST00000426249 2665 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 RNU6-1122P-201ENST00000384449 107 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 RNU6-932P-201ENST00000391108 106 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AL139421.1-201ENST00000423010 169 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 RPL7AP14-201ENST00000424041 802 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 USP9YP36-201ENST00000424581 829 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 ZYG11AP1-201ENST00000430329 837 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 COX6CP12-201ENST00000446748 202 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 MORF4-201ENST00000447135 971 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 VN1R38P-201ENST00000450265 887 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AP002453.1-201ENST00000492327 668 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 SNX18P24-201ENST00000505249 671 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 OR7E99P-201ENST00000505750 922 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC010343.2-201ENST00000510162 224 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 MTCO1P30-201ENST00000515244 580 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 SMARCE1P4-201ENST00000523647 241 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 ZNF705CP-201ENST00000530515 889 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC005000.1-201ENST00000536192 288 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC093027.1-201ENST00000546698 429 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AL121821.2-201ENST00000556081 394 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC093524.1-201ENST00000564266 1094 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC010653.1-201ENST00000571108 881 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC006006.1-201ENST00000603082 144 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC010680.4-201ENST00000605334 543 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC098614.4-201ENST00000607601 462 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 MIR7159-201ENST00000620587 66 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AL445264.1-201ENST00000621719 171 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 AC124864.2-201ENST00000624736 186 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 MAPK10-287ENST00000641217 3037 ntBASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEDD1Q8NHV4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 AL731556.1-201ENST00000394628 3711 ntBASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 Y_RNA.279-201ENST00000364763 95 ntBASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 OR1L1-202ENST00000373686 1083 ntBASIC7.4□□□□□ -1.22
NEDD1Q8NHV4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms