Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC006206.1-201ENST00000544842 3387 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 SNORA57.1-201ENST00000391227 145 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 MIR298-201ENST00000401212 88 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RN7SL802P-201ENST00000577858 299 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 PRPF19P1-201ENST00000584766 898 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 EIF3EP2-201ENST00000423042 1814 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 Z95114.1-201ENST00000624264 14574 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RNU6-316P-201ENST00000391027 107 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RPL10P17-201ENST00000453852 316 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 GLUD1P3-202ENST00000508551 200 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC008958.1-201ENST00000511047 682 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 NMNAT1P1-201ENST00000554095 876 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL591848.1-201ENST00000413092 322 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 GTF2IP5-201ENST00000414608 731 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 MRPS21P2-201ENST00000424704 264 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC016831.4-201ENST00000438302 307 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 KRT8P51-201ENST00000438938 274 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 CR381572.2-201ENST00000624852 397 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC112200.1-201ENST00000625015 234 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RNF123-214ENST00000629802 207 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC009643.2-201ENST00000603543 1448 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RNA5SP171-201ENST00000391071 115 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 HMGB3P7-201ENST00000400214 611 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC007064.3-201ENST00000422608 359 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL691482.1-201ENST00000453255 87 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC010326.1-201ENST00000462726 602 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 MIR4284-201ENST00000578924 81 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC007786.3-201ENST00000615154 596 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL121873.1-201ENST00000616013 524 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC010435.1-201ENST00000623353 1177 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 GPS2P1-201ENST00000411761 986 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 CSNK1A1P3-201ENST00000504105 330 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 SAP18P1-201ENST00000512058 390 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 BNIP3P5-201ENST00000562290 498 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms