Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 SPATA20P1-201ENST00000423089 438 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 ISCA1P1-201ENST00000426679 387 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 CYCSP11-201ENST00000436426 315 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 PA2G4P1-201ENST00000442248 1197 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AL358876.1-201ENST00000453364 1075 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 RPL31P11-202ENST00000454082 372 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 RPS4XP17-201ENST00000479057 754 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC090013.1-201ENST00000485147 480 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 RPL7P38-201ENST00000488396 739 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AL390198.2-201ENST00000510553 222 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC008549.1-201ENST00000512900 643 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 RN7SKP196-201ENST00000516267 345 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC239860.2-201ENST00000525886 270 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC091304.4-201ENST00000565703 620 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC020914.6-201ENST00000594327 272 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 BNIP3P30-201ENST00000601184 574 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC116651.1-201ENST00000609724 556 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AL589743.7-201ENST00000612637 233 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC234782.5-201ENST00000617723 324 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AL354718.1-201ENST00000619764 589 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC092650.2-201ENST00000619984 902 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC012414.7-202ENST00000622705 1090 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC021106.3-201ENST00000623925 531 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AC244258.1-201ENST00000637553 1071 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 RBPJP6-201ENST00000411556 1431 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 FANCD2P2-201ENST00000437591 1400 ntBASIC6.55□□□□□ -1.36
PHC3Q8NDX5 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PHC3Q8NDX5 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 AC015799.1-201ENST00000622996 3122 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 AC024651.2-201ENST00000562480 2098 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 PABPC1P9-201ENST00000426076 1612 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 AC087516.1-201ENST00000561236 2428 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 Y_RNA.248-201ENST00000364501 109 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 RNU6-1283P-201ENST00000365314 105 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 SNORA70H-201ENST00000383910 135 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 SNORA70J-201ENST00000384182 135 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 RN7SKP56-201ENST00000410513 331 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 AC068533.2-201ENST00000411872 306 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 UBTFL3-201ENST00000418934 1024 ntBASIC6.54□□□□□ -1.36
PHC3Q8NDX5 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.54□□□□□ -1.36
PHC3Q8NDX5 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms