Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 RPS27AP11-201ENST00000402798 447 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 NUTF2P3-201ENST00000448540 384 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AL935212.3-201ENST00000450729 284 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AC020593.1-201ENST00000507399 299 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 OR8A2P-201ENST00000528631 952 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 OR8G7P-201ENST00000616658 848 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 ZYXP1-201ENST00000617638 118 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AL158163.1-201ENST00000603915 1649 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AC100871.1-201ENST00000507871 1456 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AC022417.1-201ENST00000624768 1303 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AL591135.1-201ENST00000401578 5914 ntBASIC6.91□□□□□ -1.3
CDC42BPAQ5VT25 AC108467.2-201ENST00000617640 1597 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 OR5P1P-201ENST00000299512 925 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 RNU1-94P-201ENST00000362627 173 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 UBBP2-201ENST00000376781 231 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 PCNPP4-201ENST00000414817 517 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 AC011998.1-201ENST00000433403 117 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 AL132765.1-201ENST00000434165 553 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 RPL35AP21-201ENST00000437667 333 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 BTF3P6-201ENST00000448054 499 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 AC010547.7-201ENST00000570323 333 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 AC027216.1-201ENST00000577726 685 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 AL354984.3-201ENST00000604803 325 ntBASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.9□□□□□ -1.3
CDC42BPAQ5VT25 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 RPL21P43-201ENST00000425440 472 ntBASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 TRGV7-201ENST00000427089 353 ntBASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 RPL35P6-201ENST00000490024 372 ntBASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 AC093227.2-201ENST00000589357 285 ntBASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 AC113403.1-201ENST00000604910 193 ntBASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 AC006065.6-201ENST00000625201 545 ntBASIC6.9□□□□□ -1.31
CDC42BPAQ5VT25 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 TTC41P-205ENST00000551270 3963 ntBASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 RPS26P8-201ENST00000393490 348 ntBASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 PPIAP31-201ENST00000405422 495 ntBASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 TMBIM7P-201ENST00000418074 855 ntBASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 RPS12P10-201ENST00000427031 377 ntBASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 AC097486.1-201ENST00000515331 210 ntBASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 LARP1BP1-201ENST00000506036 1359 ntBASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 AC018628.1-201ENST00000624147 3819 ntBASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDC42BPAQ5VT25 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 AC104333.2-201ENST00000422630 192 ntBASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 AL136231.1-201ENST00000429407 730 ntBASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 HSFY6P-201ENST00000445573 403 ntBASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 RPL21P129-201ENST00000491732 478 ntBASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 AC010476.1-201ENST00000519111 851 ntBASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms