Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 RNA5SP271-201ENST00000516700 88 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 SNORA70.20-201ENST00000516848 126 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC38Q502W7 MTND1P6-201ENST00000523621 946 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 AP000919.1-202ENST00000581139 1264 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 H3F3BP2-201ENST00000583907 357 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 RN7SL622P-201ENST00000585292 275 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 OR7A19P-201ENST00000608051 733 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC096586.1-201ENST00000610267 561 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 RN7SL544P-201ENST00000617232 284 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 AL512427.1-201ENST00000618593 349 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC022960.3-201ENST00000619794 441 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 RN7SL763P-201ENST00000620922 284 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC013437.2-201ENST00000639587 677 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC087565.3-203ENST00000641018 837 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 ZNF849P-201ENST00000594711 1566 ntBASIC5.67□□□□□ -1.5
CCDC38Q502W7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC38Q502W7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC38Q502W7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC021242.1-201ENST00000507315 2035 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 OR52B3P-201ENST00000314715 928 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 RNU6-98P-201ENST00000384173 107 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 MIR122-201ENST00000385044 85 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 HMGB1P20-201ENST00000402555 677 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AL389925.1-201ENST00000432257 728 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 ARF4P4-201ENST00000439608 520 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 ARL5AP2-201ENST00000444698 533 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC016724.1-201ENST00000453215 421 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 RPL7AP10-201ENST00000481016 791 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC008427.1-201ENST00000503102 655 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC069306.1-201ENST00000507006 843 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC090568.1-201ENST00000509499 856 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC091912.1-201ENST00000511351 248 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC092709.1-201ENST00000521355 1045 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 MRPS16P1-201ENST00000523462 412 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 TRIM51DP-201ENST00000529746 596 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 RN7SL290P-201ENST00000578661 300 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 BNIP3P40-201ENST00000596017 556 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AP002906.1-201ENST00000603405 233 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AP002802.2-201ENST00000605877 235 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC108865.2-201ENST00000606881 432 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC016597.2-201ENST00000613256 341 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 STMN1P1-201ENST00000617809 440 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AL669942.2-201ENST00000620352 697 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC099654.8-201ENST00000637757 681 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC38Q502W7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC38Q502W7 SRRM1P3-201ENST00000426911 2678 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 SEC63P2-201ENST00000503863 1939 ntBASIC5.66□□□□□ -1.5
CCDC38Q502W7 AC083843.2-201ENST00000568248 6253 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC38Q502W7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC38Q502W7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC38Q502W7 SOCS5P3-201ENST00000425115 1576 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC38Q502W7 RNA5SP394-201ENST00000364216 119 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC096533.1-201ENST00000411645 353 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AL022331.1-201ENST00000429025 477 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms