Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 GAPDHP14-201ENST00000450472 937 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 PRPF38AP1-201ENST00000451976 933 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC073358.1-201ENST00000505671 684 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC034205.1-201ENST00000520621 638 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC133555.2-201ENST00000550213 292 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 MIR4715-201ENST00000584117 79 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AL354950.1-201ENST00000614150 568 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC091932.2-201ENST00000623014 291 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC021106.3-201ENST00000623925 531 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 AC068446.1-201ENST00000556425 1549 ntBASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM1Q2M3G4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 RNU1-82P-201ENST00000390851 165 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 RPS4XP9-201ENST00000405151 780 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AC006065.1-201ENST00000422539 802 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AL354766.1-201ENST00000423396 542 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AL732292.1-201ENST00000426692 226 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 RPL23AP1-201ENST00000428990 471 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AC004980.3-201ENST00000447046 365 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 snoU13.1-201ENST00000459157 104 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AC097486.1-201ENST00000515331 210 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 RN7SL802P-201ENST00000577858 299 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AL121890.2-201ENST00000617644 465 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 AC139713.2-214ENST00000642059 1811 ntBASIC5.67□□□□□ -1.5
SHROOM1Q2M3G4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AP001029.2-203ENST00000589795 4910 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AC009643.2-201ENST00000603543 1448 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 SCARNA15-201ENST00000607520 4325 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 SNORA73.1-201ENST00000363107 205 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 MIR298-201ENST00000401212 88 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 COX6CP17-201ENST00000421389 185 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 RN7SKP92-201ENST00000517266 244 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 IGKV1-32-201ENST00000519290 311 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AC100784.1-201ENST00000522790 310 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AL390334.1-201ENST00000556395 450 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 MIR5699-201ENST00000578903 90 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 AC012414.7-202ENST00000622705 1090 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 CR381572.2-201ENST00000624852 397 ntBASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM1Q2M3G4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms