Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RNA5SP132-201ENST00000364725 118 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RNU6-40P-201ENST00000384254 107 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC211486.3-201ENST00000412694 621 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RANP4-201ENST00000413361 655 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC006455.6-201ENST00000426192 893 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AL121776.1-201ENST00000429337 372 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RPS26P4-201ENST00000431743 355 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 PCNPP2-201ENST00000441651 455 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 BTBD7P2-201ENST00000441962 620 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RPS15AP29-201ENST00000445539 400 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC093166.2-201ENST00000455969 1017 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RN7SL443P-201ENST00000464331 290 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RPL7P6-201ENST00000480903 738 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 CDH12P2-201ENST00000504393 298 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RNA5SP360-201ENST00000516555 118 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC090888.3-201ENST00000558917 509 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 NDUFB4P11-201ENST00000560510 395 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 SULT1C2P2-201ENST00000562517 294 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AL137072.1-201ENST00000603444 466 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC133552.5-201ENST00000604266 540 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC242628.1-201ENST00000606810 391 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC023813.4-201ENST00000607580 580 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC109309.2-201ENST00000612597 332 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AL354696.1-201ENST00000614652 497 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC007204.2-201ENST00000615022 616 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC145207.9-201ENST00000623802 325 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC005332.5-201ENST00000591222 2919 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 ADAM5-202ENST00000399789 1942 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 ZNF733P-202ENST00000444809 1573 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC011447.7-201ENST00000624228 1590 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 AL731566.1-201ENST00000620490 1937 ntBASIC3.37□□□□□ -1.87
SYCNQ0VAF6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 U3.3-201ENST00000362986 216 ntBASIC3.37□□□□□ -1.87
SYCNQ0VAF6 RN7SKP15-201ENST00000364742 309 ntBASIC3.37□□□□□ -1.87
SYCNQ0VAF6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SYCNQ0VAF6 SNORA68.2-201ENST00000391263 128 ntBASIC3.37□□□□□ -1.87
SYCNQ0VAF6 OR1F12-201ENST00000402365 945 ntBASIC3.37□□□□□ -1.87
SYCNQ0VAF6 RN7SKP222-201ENST00000410651 315 ntBASIC3.37□□□□□ -1.87
SYCNQ0VAF6 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms