Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 HSPD1P16-201ENST00000402302 394 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 HDGFP1-201ENST00000405943 252 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 RPL23AP48-201ENST00000406913 488 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AL160275.2-201ENST00000412010 394 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 SEPT7P8-201ENST00000413308 775 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 SLC35E1P1-201ENST00000419313 864 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 NMNAT1P2-201ENST00000435192 860 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AL691482.1-201ENST00000453255 87 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 IGLVIV-64-201ENST00000518581 301 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AC004825.1-201ENST00000555068 586 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 SULT1C2P2-201ENST00000562517 294 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 OR1F2P-201ENST00000570470 933 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 CYCSP40-201ENST00000575927 294 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AC019206.1-201ENST00000621938 425 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 DDX18P5-201ENST00000534547 1306 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 MIR448-201ENST00000362131 111 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 RN7SKP160-201ENST00000363804 340 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 GCNT6-201ENST00000379591 934 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 SNORA66-201ENST00000384792 133 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 U3.25-201ENST00000391209 220 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 DUTP5-201ENST00000406790 469 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 SNORA77-201ENST00000408716 125 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 CEACAMP8-201ENST00000413902 580 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AL391987.1-201ENST00000441025 200 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AL354714.3-201ENST00000447284 493 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AL606490.1-201ENST00000452266 765 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 RPL10P17-201ENST00000453852 316 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 APOOP2-201ENST00000461561 539 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC010469.1-201ENST00000463864 576 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC083829.1-201ENST00000503756 657 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 PGAM1P13-201ENST00000507497 754 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 EIF1P5-201ENST00000585002 234 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC095055.1-201ENST00000603472 1113 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC026979.4-201ENST00000606555 645 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AP005432.2-201ENST00000608162 586 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC126915.2-201ENST00000610957 190 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AL158062.1-201ENST00000619632 745 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 CASC19-206ENST00000641028 1430 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 MAPK10-303ENST00000641324 3959 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 A2MP1-204ENST00000566278 4130 ntBASIC3.75□□□□□ -1.81
HIST1H1AQ02539 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms